Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|37843404|gb|BJ601412.1|BJ601412EST: ACTCGCACAACGTCACCGACTGCAAGGAGATCGCGTGCTACATCAAGAAG CAATTCGACAAGACATATGGCGCAGGGTGGCAGTGTGTCACCGGCGTCGGC
genomic: ACTCGCACAACGTCACCGACTGCAAGGAGATCGCGTGCTACATCAAGAAGgttagttagt ... cgcattgcagCAATTCGACAAGACATATGGCGCAGGGTGGCAGTGTGTCACCGGCGTCGGC
EST:
gi|37847311|gb|BJ605319.1|BJ605319EST: CTCGCACAACGTCACCGGACTGCAAGGAGATCGCGTGCTACATCAAGAAG CAATTCGACAAGACATATGGCGCAGGGTGGCAGTGTGTCACCGGCGTCGGC
genomic: CTCGCACAACGTCACC-GACTGCAAGGAGATCGCGTGCTACATCAAGAAGgttagttagt ... cgcattgcagCAATTCGACAAGACATATGGCGCAGGGTGGCAGTGTGTCACCGGCGTCGGC
EST:
gi|18372889|gb|BJ204491.1|BJ204491EST: CTCGCACAACGTCACCGACTGCAAGGAGAATCGCGTGCTACATCAAGAAG CAATTCGACAAGA
genomic: CTCGCACAACGTCACCGACTGCAAGGAGA-TCGCGTGCTACATCAAGAAGgttagttagt ... cgcattgcagCAATTCGACAAGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GCCGCACTTGATGCAATCGCACGCGCTGCGCGTGGCATCGGAAGCGCTGGACTCGCACAACGTCACCGACTGCAAGGAGATCGCGTGCTACATCAAGAAGgttagttagtcaaacgcctgctcggcgatccctttgctcgttcattcgcagctcgtcgcaattctcgtggcgctgacgatggcttcgggtgctccgcattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG