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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGTACCAATTCGTCGACAAGTACGGTGCCAACGTCGATGGATACAGTCCTATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccatcgcctaatctccggagcccttttgtgaaagagtattgagaattcttgctttgggatttttcattacagtcaaaagctcaggcgatatgtt...

Basic information

species Physcomitrella patens
transcript PP1S54_167V6.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S54_167V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: LOC_Os08g10020.1 (Oryza sativa), 5'ss of exon 3
---------GTGTACCAATTCGTCGACAAGTACGGTGCCAACGTCGATGGATACAGTCCTATCTACGCTAAGG---AGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccatcgcctaatctccggagcccttttgtgaaagagtattgagaattcttgctttgggatttttcattacagtcaaaagctcaggcgatatgtt
         |||||||||||||| ||||||||||| || |||||||| || |||||   || | | | | ||    |  | |      | |   || |||  ||||  ||          |||  ||  | |  | |    || | ||    | | |    || ||   ||    |||||                                
GGGAAGGGTGTGTACCAATTCGTTGACAAGTACGGCGCAAACGTCGACGGCTACAGg--taaccaagatgagatataaaattaatattaaaagagt-acttttacggtgg---------tatctacttgttttagcaaaaattgtttggctcaatctgacaaactc---ctcgacgatttgcag----------------------------

upper sequence: PP1S54_167V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM2G174984_T01 (Zea mays), 5'ss of exon 3
---------GTGTACCAATTCGTCGACAAGTACGGTGCCAACGTCGATGGATACAGT-------CCTATC-TACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccatcgcctaatctccggagcccttttgtgaaagagtattgagaattcttgctttgggatttttcattacagtcaaaagctcaggcgatatgtt-----
         |||||||| ||||||||||||||||| || |||||||| ||||||||        | |||     ||  |  ||         || |   ||||    |  |   | | |||  ||||     |||    |  | ||     || |  | | |    | |  | | | |  || | | |  |    | ||    |  ||| ||   |      
GGCAAGGGCGTGTACCAGTTCGTCGACAAGTACGGCGCGAACGTCGACGGATACAGgtgatgagcttattgcttgcccatcagcgccccccaaaaaaaagtgaaatttgtgt--gtgatga-cccatg---caattgttgacgacc----atgcattattttgatcagtcgtagttgttcgactgtactgtgtttttaattaatttggcaatgaatctgcag

upper sequence: PP1S54_167V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: Vv19s0027g00200.t01 (Vitis vinifera), 5'ss of exon 3
---------GTGTACCAATTCGTCGACAAGTACGGTGCCAACGTCGATGGATACAG-TCCTATCTACGCTAAGGAG---GAGTGGAGCAAGAGTGG--TGACTCCTACGCCGGA-Ggtgagtccatcgcctaatctccggagcccttttgtgaaagagtattgagaattcttgctttgggatttttca-ttacagtcaaaagctcaggcgatatgtt
         || |||||||||||||| || |||||||||||||| ||||||||||| |   || ||   | |        | |  |     |||||  | |     |  | | | | || |        ||||| |    |    ||      || | ||   | || |       |   |||| | | ||   |  ||    |     |       
GGAAAGGGAGTCTACCAATTCGTCGATAAATACGGTGCCAACGTGGATGGATACAGgtagaatttatttttatttttttaatttaatttttagtggcttaaaaaaaatactgaatgctgtgaatgatttctaatttattcaaattttaaaaataataataagaataaataggaaaataaaatttctaactttttgataatgatttcattgcag----

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162201331|gb|FC376849.1|FC376849
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162246556|gb|FC422484.1|FC422484
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|208350827|gb|DC909916.1|DC909916
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162246946|gb|FC424772.1|FC424772
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162267438|gb|FC443981.1|FC443981
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162204189|gb|FC378947.1|FC378947
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162231829|gb|FC408591.1|FC408591
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162267966|gb|FC444047.1|FC444047
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162230316|gb|FC406880.1|FC406880
EST:     TATTTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATTTGGGCTCNNNNNNNGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162278693|gb|FC454803.1|FC454803
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162253650|gb|FC430388.1|FC430388
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162245092|gb|FC422099.1|FC422099
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162217087|gb|FC393387.1|FC393387
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162238272|gb|FC415866.1|FC415866
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162242654|gb|FC415019.1|FC415019
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|100398577|gb|BY972682.1|BY972682
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162274707|gb|FC450786.1|FC450786
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162218417|gb|FC394799.1|FC394799
EST:     TATTTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162279078|gb|FC455417.1|FC455417
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162247354|gb|FC420292.1|FC420292
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162232074|gb|FC407689.1|FC407689
EST:     TATCTACGCTAACGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162211751|gb|FC387415.1|FC387415
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|18339417|gb|BJ171444.1|BJ171444
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162232478|gb|FC408873.1|FC408873
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162226599|gb|FC402501.1|FC402501
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|18339269|gb|BJ171296.1|BJ171296
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162230625|gb|FC406048.1|FC406048
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162212271|gb|FC388381.1|FC388381
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162240286|gb|FC414331.1|FC414331
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162230317|gb|FC406881.1|FC406881
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|13315690|gb|BG409345.1|BG409345
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|37833955|gb|BJ591967.1|BJ591967
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162204069|gb|FC379438.1|FC379438
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|100388142|gb|BY988615.1|BY988615
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162240747|gb|FC416326.1|FC416326
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162191023|gb|FC368429.1|FC368429
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|37852964|gb|BJ610972.1|BJ610972
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|208344492|gb|DC905053.1|DC905053
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCTGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162219078|gb|FC394661.1|FC394661
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|19778491|gb|BQ039319.1|BQ039319
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162241678|gb|FC418661.1|FC418661
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162233616|gb|FC409375.1|FC409375
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162241822|gb|FC418077.1|FC418077
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162278694|gb|FC454804.1|FC454804
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|208379244|gb|DC918944.1|DC918944
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCTGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|18359559|gb|BJ191620.1|BJ191620
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162221254|gb|FC398077.1|FC398077
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162221255|gb|FC398078.1|FC398078
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|18352523|gb|BJ184577.1|BJ184577
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTTGGTT
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTT-GGTT
EST: gi|162267437|gb|FC443980.1|FC443980
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162251732|gb|FC427464.1|FC427464
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162246945|gb|FC424771.1|FC424771
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162214871|gb|FC391006.1|FC391006
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|208384889|gb|DC907502.1|DC907502
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162254021|gb|FC429337.1|FC429337
EST:     TATCTACCCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTAG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162218418|gb|FC394800.1|FC394800
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162246555|gb|FC422483.1|FC422483
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162211750|gb|FC387414.1|FC387414
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162212452|gb|FC388700.1|FC388700
EST:     TATTTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162238271|gb|FC415865.1|FC415865
EST:     TATTTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162242700|gb|FC417522.1|FC417522
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162274469|gb|FC450704.1|FC450704
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162260046|gb|FC435765.1|FC435765
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162225849|gb|FC402141.1|FC402141
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|208356849|gb|DC926860.1|DC926860
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162231828|gb|FC408590.1|FC408590
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162232300|gb|FC408643.1|FC408643
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162223739|gb|FC399486.1|FC399486
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162251731|gb|FC427463.1|FC427463
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162260045|gb|FC435764.1|FC435764
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162251856|gb|FC426964.1|FC426964
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162245224|gb|FC422972.1|FC422972
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162274470|gb|FC450705.1|FC450705
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162222089|gb|FC397317.1|FC397317
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162240746|gb|FC416325.1|FC416325
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|100377156|gb|BY968390.1|BY968390
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162226903|gb|FC403091.1|FC403091
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|67725974|gb|BJ976233.1|BJ976233
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|208381839|gb|DC923768.1|DC923768
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|67700944|gb|BJ961177.1|BJ961177
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162202923|gb|FC380308.1|FC380308
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|67573965|gb|BJ946789.1|BJ946789
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162267967|gb|FC444048.1|FC444048
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162262426|gb|FC439482.1|FC439482
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162259098|gb|FC435170.1|FC435170
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162237628|gb|FC413672.1|FC413672
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|6167445|gb|AW145709.1|AW145709
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|67578080|gb|BJ950247.1|BJ950247
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162249927|gb|FC427652.1|FC427652
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162225601|gb|FC401535.1|FC401535
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162249510|gb|FC426754.1|FC426754
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162254022|gb|FC429338.1|FC429338
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|208352654|gb|DC921388.1|DC921388
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162225069|gb|FC401693.1|FC401693
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162269894|gb|FC445918.1|FC445918
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
EST: gi|162227231|gb|FC402848.1|FC402848
EST:     TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAG                         GAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG
genomic: TATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 283

GTGTACCAATTCGTCGACAAGTACGGTGCCAACGTCGATGGATACAGTCCTATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccat ... tactatgcagGAACTCCCGCTCTTGCCATCTGGGCTCTTCTTTTGGGTGGACTTTTGGTTGGCGGTGCTCTTCTCGTATACAACACCTCTGCACTGAGCGGCTAGACTTG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTGTACCAATTCGTCGACAAGTACGGTGCCAACGTCGATGGATACAGTCCTATCTACGCTAAGGAGGAGTGGAGCAAGAGTGGTGACTCCTACGCCGGAGgtgagtccatcgcctaatctccggagcccttttgtgaaagagtattgagaattcttgctttgggatttttcattacagtcaaaagctcaggcgatatgtt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAAGA