Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100417107|gb|BY957171.1|BY957171EST: AAACCTAGGTCTTCGTGTGTAGAGATATGTGACCTTGCATCTGCTGATTG TGGCATGGATTTCACTCGAGAGAGGGGATAATGAAGAAGAAGTTGTGAAGG
genomic: AAACCTAGGTCTTCGTGTGTAGAGATATGTGACCTTGCATCTGCTGATTGgtaagccaag ... atctttgcagTGGCATGGATTTCACTCGAGAGAGGGGATAATGAAGAAGAAGTTGTGAAGG
EST:
gi|18345726|gb|BJ177769.1|BJ177769EST: AAACCTAGGTCTTCGTGTGTAGAGATATGTGACCTTGCATCTGCTGATTG TGGCATGGATTTCACTCGAGAGAGGGGATAATGAAGAAGAAGTTGTGAAGG
genomic: AAACCTAGGTCTTCGTGTGTAGAGATATGTGACCTTGCATCTGCTGATTGgtaagccaag ... atctttgcagTGGCATGGATTTCACTCGAGAGAGGGGATAATGAAGAAGAAGTTGTGAAGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGATGCGCGACGATTATTCGTAACAGCAGCTGCATTTAAGTATTGAAACGAAACCTAGGTCTTCGTGTGTAGAGATATGTGACCTTGCATCTGCTGATTGgtaagccaagagctttatgcgcattccatgtttctggcataagcaagattcttagatttaggtctagggtttgttctccacattttaatcttgtttttagctggaattgcatctttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT