Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18357618|gb|BJ189677.1|BJ189677EST: CTTCACGGCTGATAAACACTTTCTCCATCGCTCAAGAAACGCTGTAGTTT GTCGTATTTATGACGTAACAGAGGCTCCAGTGATGCTGTCACCGTTGTGCA
genomic: CTTCACGGCTGATAAACACTTTCTCCATCGCTCAAGAAACGCTGTAGTTTgtattttatt ... tactctgcagGTCGTATTTATGACGTAACAGAGGCTCCAGTGATGCTGTCACCGTTGTGCA
EST:
gi|18357039|gb|BJ189098.1|BJ189098EST: CTTCACGGCTGATAAACACTTTCTCCATCGCTCAAGAAACGCTGTAGTTT GTCGTATTTATGACGTAACAGAGGCTCCAGTGATGCTGTCACCGTTGTGCA
genomic: CTTCACGGCTGATAAACACTTTCTCCATCGCTCAAGAAACGCTGTAGTTTgtattttatt ... tactctgcagGTCGTATTTATGACGTAACAGAGGCTCCAGTGATGCTGTCACCGTTGTGCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAGCTACCACTCAATTCATCTTCTTCCGCAAATAGCCGCGAGGGAGGAGTCTTCACGGCTGATAAACACTTTCTCCATCGCTCAAGAAACGCTGTAGTTTgtattttattccattttctctgaaagttttaggccctaggagtctgattgtttaacgacctgtaccaagtattgcatttggtgggttagtatctgcatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA