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 5'  3'   		2  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTATCGATTTGAAGGCCGGTGGCCGCAACAAGAAAACCAAGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctcttaatgtttacagccgcgcctttgctcttcgtttcctctctcatttaagatgaaacttagggtatatatccacttctaggatgactgattg...

Basic information

species Physcomitrella patens
transcript PP1S304_9V6.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S304_9V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: EFJ22685 (Selaginella moellendorffii), 5'ss of exon 2
GGTATCGATTTGAAGGCCGGTGGCCGCAACAAGAAAACCAAGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctcttaatgtttacagccgcgcctttgctcttcgtttcctctctcatttaagatgaaacttagggtatatatccacttctaggatgactgattg
||||||||  |  | ||||| || ||||||||||| |||||||| || || ||||||||  | ||||||||||| ||||| ||||| ||||||        | ||  |        || || | |||        |  |  ||||   | | |  ||    |  || |||   |||   |          
GGTATCGACATCGAAGCCGGCGGGCGCAACAAGAAGACCAAGCGGACAGCCCCCAAGAGTGACAATGTCTACCTCAAGCTGCTCGTCAAGgtg--------agtgcgtgggatttggcattggatctatagcggttgcccgatttctcacgcattttcttttccat-tccctctctgtcag---------

upper sequence: PP1S304_9V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: EFJ13065 (Selaginella moellendorffii), 5'ss of exon 2
GGTATCGATTTGAAGGCCGGTGGCCGCAACAAGAAAACCAAGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctcttaatgtttacagccgcgcctttgctcttcgtttcctctctcatttaagatgaaacttagggtatatatccacttctaggatgactgattg
||||||||  |  | ||||| || ||||||||||| |||||||| || || ||||||||  | ||||||||||| ||||| ||||| ||||||        | ||  |        || || | |||        |     ||||   | | |  ||    |  || ||| ||                 
GGTATCGACATCGAAGCCGGCGGGCGCAACAAGAAGACCAAGCGGACAGCCCCCAAGAGTGACAATGTCTACCTCAAGCTGCTCGTCAAGgtg--------agtgcgtgggatttggcattggatctagagcggttgcgcgatttctcacgcattttcttttccatttcctctctcgcag----------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18331739|gb|BJ163750.1|BJ163750
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18335273|gb|BJ167291.1|BJ167291
EST:     CAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: CAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|37851571|gb|BJ609579.1|BJ609579
EST:     CGCTCCCAAGGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: CGCTCCCAA-GAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208396460|gb|DC920098.1|DC920098
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162237844|gb|FC413940.1|FC413940
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18335274|gb|BJ167292.1|BJ167292
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162253191|gb|FC429127.1|FC429127
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162237843|gb|FC413939.1|FC413939
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162201106|gb|FC377613.1|FC377613
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208351915|gb|DC917962.1|DC917962
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCNTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162200225|gb|FC376591.1|FC376591
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162236835|gb|FC412578.1|FC412578
EST:     GTCTACCTGAAGCTTCTCGTT-AG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: GTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|100431547|gb|BY960252.1|BY960252
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208383682|gb|DC911434.1|DC911434
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162236834|gb|FC412577.1|FC412577
EST:     GTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: GTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162271542|gb|FC446491.1|FC446491
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67703076|gb|BJ963309.1|BJ963309
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208390134|gb|DC949444.1|DC949444
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208352588|gb|DC918297.1|DC918297
EST:     AGAGCCAGAATGTCTACCTGAAGC-TCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162261648|gb|FC438081.1|FC438081
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67718707|gb|BJ968966.1|BJ968966
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162253192|gb|FC429128.1|FC429128
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162264027|gb|FC439881.1|FC439881
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162260468|gb|FC436108.1|FC436108
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18370324|gb|BJ201926.1|BJ201926
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208368999|gb|DC955084.1|DC955084
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162215595|gb|FC391674.1|FC391674
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162252936|gb|FC429309.1|FC429309
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18337207|gb|BJ169231.1|BJ169231
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18331871|gb|BJ163883.1|BJ163883
EST:     AGCGTACCGCTCCCAAGAGCCANAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162214480|gb|FC391447.1|FC391447
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208368256|gb|DC935639.1|DC935639
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162260482|gb|FC436109.1|FC436109
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208393442|gb|DC904060.1|DC904060
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162216778|gb|FC392792.1|FC392792
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18366734|gb|BJ198813.1|BJ198813
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162262940|gb|FC440022.1|FC440022
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18363579|gb|BJ195651.1|BJ195651
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208398098|gb|DC904403.1|DC904403
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18371401|gb|BJ203003.1|BJ203003
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67727887|gb|BJ978146.1|BJ978146
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162264028|gb|FC439882.1|FC439882
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162279903|gb|FC455187.1|FC455187
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162277065|gb|FC453787.1|FC453787
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162200582|gb|FC377817.1|FC377817
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CCTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208350596|gb|DC906212.1|DC906212
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67717423|gb|BJ967682.1|BJ967682
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162258561|gb|FC434776.1|FC434776
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162236605|gb|FC413700.1|FC413700
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67573932|gb|BJ946756.1|BJ946756
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18328999|gb|BJ161005.1|BJ161005
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|100407626|gb|BY991780.1|BY991780
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67719620|gb|BJ969879.1|BJ969879
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18368146|gb|BJ200231.1|BJ200231
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162260030|gb|FC435749.1|FC435749
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208354242|gb|DC902470.1|DC902470
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162274670|gb|FC450463.1|FC450463
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18349205|gb|BJ181254.1|BJ181254
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162279902|gb|FC455186.1|FC455186
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162201882|gb|FC377816.1|FC377816
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CCTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|37840715|gb|BJ598723.1|BJ598723
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208391202|gb|DC942086.1|DC942086
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162231094|gb|FC406205.1|FC406205
EST:     GCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: GCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162236606|gb|FC413701.1|FC413701
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162214479|gb|FC391446.1|FC391446
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|37836171|gb|BJ594179.1|BJ594179
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208397400|gb|DC916340.1|DC916340
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208399994|gb|DC925234.1|DC925234
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162271541|gb|FC446490.1|FC446490
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18360407|gb|BJ192469.1|BJ192469
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162261572|gb|FC437589.1|FC437589
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67725940|gb|BJ976199.1|BJ976199
EST:     AAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162262941|gb|FC440023.1|FC440023
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|37853186|gb|BJ611194.1|BJ611194
EST:     TGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: TGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162260029|gb|FC435748.1|FC435748
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|18326162|gb|BJ158161.1|BJ158161
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162255660|gb|FC431658.1|FC431658
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208395139|gb|DC923938.1|DC923938
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162277066|gb|FC453788.1|FC453788
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|208352918|gb|DC910095.1|DC910095
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|37851155|gb|BJ609163.1|BJ609163
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162258562|gb|FC434777.1|FC434777
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|67697320|gb|BJ957553.1|BJ957553
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|37847124|gb|BJ605132.1|BJ605132
EST:     AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: AGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
EST: gi|162200224|gb|FC376590.1|FC376590
EST:     GAAGCTTCTCGTTAAG                         CTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC
genomic: GAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 34 (upstream exon), 35 (downstream exon)
Score: 57

GGTATCGATTTGAAGGCCGGTGGCCGCAACAAGAAAACCAAGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctct ... tcgcttgcagCTTTACAGGTTCTTGGTCAGGAGGACTGACGCTCCCTTCAACAGTGTTGTCTTGAAACGTCTGTTCATGAGTAGGACGAACAGGGCTCCTCTTTCTATGA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGTATCGATTTGAAGGCCGGTGGCCGCAACAAGAAAACCAAGCGTACCGCTCCCAAGAGCCAGAATGTCTACCTGAAGCTTCTCGTTAAGgtgcacctcttaatgtttacagccgcgcctttgctcttcgtttcctctctcatttaagatgaaacttagggtatatatccacttctaggatgactgattg

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC