Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18352659|gb|BJ184714.1|BJ184714EST: GTGAGGATGTCCAGCCTTTGGTGTGCGACAATGGATCCGGAATGGTGAAG GCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTG
genomic: GTGAGGATGTCCAGCCTTTGGTGTGCGACAATGGATCCGGAATGGTGAAGgtatgatatt ... ttttatgcagGCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTG
EST:
gi|18366967|gb|BJ199047.1|BJ199047EST: GTGAGGATGTCCAGCCTTTGGTGTGCGACAATGGATCCGGAATGGTGAAG GCTGGNTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTG
genomic: GTGAGGATGTCCAGCCTTTGGTGTGCGACAATGGATCCGGAATGGTGAAGgtatgatatt ... ttttatgcagGCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTG
EST:
gi|208389210|gb|DC933238.1|DC933238EST: GTGAGGATGTCCAGCCTTTGGTGTGCGACAATGGATCCGGAATGGTGAAG GCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTG
genomic: GTGAGGATGTCCAGCCTTTGGTGTGCGACAATGGATCCGGAATGGTGAAGgtatgatatt ... ttttatgcagGCTGGTTTCGCTGGAGATGACGCCCCCCGCGCCGTGTTTCCGAGCATCGTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGTATTTCTTCTCCATGGCTGGAGAGGGTGAGGATGTCCAGCCTTTGGTGTGCGACAATGGATCCGGAATGGTGAAGgtatgatattaactgttttgatgatgcatttgtattctccctatgtgatgaagtggcttgcaataaaatgcagttctaaagcatgtcatgggccaagctgggtcgttatcgtcttcttcacatcgtggtatctctgtgatcggcacaaaacctaaaatgttggtattgtgcggattttatgcag
- - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - AGGATG