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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag

Basic information

species Physcomitrella patens
transcript PP1S18_121V6.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: LOC_Os01g64090.1 (Oryza sativa), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcag-gttgattacctcttatttattcgccccattattgcgtaacag
 || || || |||||||||||||| || || ||| |||| ||||| || ||||||||||||   ||||||||||| || ||||||||||| ||||| ||||||||       ||||   ||    ||    ||     ||     ||||   |||  || |||  ||     | ||      || || ||  ||  |   | ||        
TCAAAAGGATAAGCGTTTCAGTGGATCTGTTAAGTTGCCTCACATCCCCCGCCCTAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCATGTTGAAGAGgtattgt-----actctttta---tcagttttgc-atcaacttccttgtgtacataacagattgtgctttagtaatagaaaattgttgataggcttctacaatgaaggg---

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: LOC_Os02g21660.1 (Oryza sativa), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttc---ctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattac--ctcttatttattcgccccattattgcgtaacag
 || || || ||||||||||||||||| || |||||||| ||||| ||||| |||||| ||   || |||||||| || ||||| |||||||| || ||||||| |    ||   ||| |  |        |   |||  ||       |||    |   |   |  ||||  | | |     ||  ||  ||||   |                 
TCAAAAGGATAAGCGTTTCAGTGGTTCTGTTAAGCTGCCCCACATCCCTCGGCCTAAGTTGAAGGTTTGCATGCTTGGTGATGCTCAGCACGTCGAAGAGgtatgttatgcttctactgattttgcattgacttggttttgatatgagatgtggagagaacttttatcgcaattgggtagttactactacgtatttagca----------------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: LOC_Os08g44450.1 (Oryza sativa), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactca-actaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 || || |||||||||||||| || ||||| |||||||| || || || ||||| ||||||   || |||||||| || ||||||||||| || |||||||||        |   || ||  ||        |||  |   | |     || |  |        |   ||| |  |    ||| | | ||       |              
GCAAAAGGACAAGCGTTTCAGCGGCTCCGTCAAGCTGCCCCATATCCCCCGCCCCAAGATGAAGGTCTGCATGCTTGGTGATGCCCAGCATGTCGAGGAGgtaagattatgatgccatacccattttgattttgtaaatttgtacaccctccgtttagattgaaattgaggattttcctttctcactcatgtaagtgacc------------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: LOC_Os08g44380.2 (Oryza sativa), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattac-gcaggttgattacctcttatttattcgccccattattgcgtaacag
 || || |||||||||||||| || ||||| |||||||| || || || ||||| ||||||   || |||||||| || ||||||||||| || |||||||||        |  |    |  ||  | |||| |||   |        |   || |  ||||||  | ||  |  |  |   ||    |   |     ||| ||  | |   
ACAAAAGGACAAGCGTTTCAGCGGCTCCGTTAAGCTGCCCCATATCCCCCGCCCCAAGATGAAGGTCTGCATGCTTGGTGATGCCCAGCATGTCGAGGAGgta--------agatatgatgttgt-agccattttgtttaattcagactttacaggttacattattgtagtattttctcaatttgaacacatgtagtgttactgaatta---

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM2G181194_T01 (Zea mays), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag-
 || || ||||||||||||||||| || || ||| |||| ||||| ||||| || ||||||   ||||||||||| || ||||||||||||||||||||||||         |  ||  | |||   | |   |||| ||     || |    |||    |  | ||  |  |  ||     | |  |    | ||| |  | ||    |  
ACAAAAGGACAAGCGTTTCAGTGGCTCTGTTAAGTTGCCTCACATCCCTCGTCCAAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCACGTTGAGGAGgtaaac------aggcagttgatgatgcac---ttgaaaatgtacttatttatatgttgaac-atgcttgcag--tagtaaatctgcaaaaacaccaatgcttcgagttact

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM2G023748_T02 (Zea mays), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag---
 || || |||||||| ||||| ||||| || |||||||| ||||| |||||||||||||||   || |||||||| || ||||| ||||| ||||||||||||| |  | |   || |  |   |  ||  ||||        ||||| |   |    || |    |      |||       | ||||| || |   ||  |  ||  ||   
TCAAAAGGACAAGCGCTTCAGCGGTTCTGTTAAGCTGCCTCACATCCCTCGCCCTAAGATGAAGGTTTGCATGCTTGGTGATGCTCAGCATGTTGAGGAGgtatgt--tatgcttccatcatctcgtcctgtgtt------ttttttggcgtaaatttacttggtactcaggaatt------caattatttgctcttgtagcgaatatgagctt

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM2G170561_T01 (Zea mays), 5'ss of exon 4
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcat-tttgtcagcatgccaca-ttacgcaggttgat-tacctcttatttattcgccccattattgcgtaacag
 || || ||||||||||||||||| ||  ||||| |||| ||||| ||||  || ||||||   ||||||||||| || ||||||||||||||||||||||||         |  ||  | |||   | | ||   |    | | ||| |  |     ||   || |    ||  || | |     |   || |  |   ||| |         
ACAAAAGGACAAGCGTTTCAGTGGCTCTATGAAGTTGCCTCACATCCCTCATCCAAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCACGTTGAGGAGgtaaac------aggcagttgatgatgcacttgaaaatgtacttatttatatgttgaacatgcttgcagtagtaaatctgcaaaacaccaatgcttcgagttactc--------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM2G144387_T01 (Zea mays), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttattt--attcgccccattattgcgtaacag--
 ||||| ||||||||||||||||| || || ||| |||| || || ||||| || ||||||   ||||||||||| || ||||||||||| ||||||||||||      | | |   | | |||    |    |  | | ||| ||| |         |  ||   || | | ||      | |  |  |    | ||| | ||  | |  |   
ACAGAAGGACAAGCGTTTCAGTGGCTCTGTTAAGTTGCCCCATATCCCTCGTCCCAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCATGTTGAGGAGgtaag----caagc---attgatg--gtctgcttcaacatgcacttttttg------tatgttgaacatgctaatggttgttgaactgaaaaaacaccagtgttttgaattattc

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM2G074769_T01 (Zea mays), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag-
 || || |||||| |||||||||| || || ||| |||| | ||| ||||| || ||||||   ||||||||||| || ||||||||||||||||||||||||  |      |  ||  | |||   | | ||   | | | | ||  | ||  ||    |  | ||  |  |  ||     | |  |    | | | |  | ||    |  
ACAAAAGGACAAGAGTTTCAGTGGCTCTGTTAAGTTGCCTCGCATCCCTCGTCCAAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCACGTTGAGGAGgtaaat------aggcagttgatgatgcacttg--aaaatgtacttatttagt-tgttgaac-atgcttgcag--tagtaaatctgcaaaaacactaatgcttcgagttact

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM5G862017_T01 (Zea mays), 5'ss of exon 9
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcat-tttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 || || ||||||||||||||||| ||  | ||| |||| ||||| ||||| || ||||||   ||||||||||| || |||||||| |||||||||||||||         |  ||  | |||   | |   |||| ||   |  || |    |||    |  | ||  |  |  ||     | |  |    | | | |  | ||    | 
ACAAAAGGACAAGCGTTTCAGTGGCTCTATTAAGTTGCCTCACATCCCTCGTCCAAAGATGAAGGTGTGCATGCTTGGTGATGCCCAACACGTTGAGGAGgtaaac------aggcagttgatgatgcac---ttgaaaaatgtacttatttatatgttgaac-atgcttgcag--tagtaaatctgcaaaaacactaatgcttcgagttac

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GRMZM2G369991_T01 (Zea mays), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag-
 || || |||||| |||||||||| || || ||| |||| | ||| ||||| || ||||||   ||||||||||| || ||||||||||||||||||||||||         |  ||  | |||   | | ||   | | | | ||  | ||  ||    |  | ||  |  |  ||     | |  |    | | | |  | ||    |  
ACAAAAGGACAAGAGTTTCAGTGGCTCTGTTAAGTTGCCTCGCATCCCTCGTCCAAAGATGAAGGTGTGCATGCTTGGTGATGCCCAGCACGTTGAGGAGgtaaac------aggcagttgatgatgcacttg--aaaatgtacttatttagt-tgttgaac-atgcttgcag--tagtaaatctgcaaaaacactaatgcttcgagttact

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GLYMA19G37980.1 (Glycine max), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtat---ttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 |||||||| ||||||||||||||||| || ||||| || || ||||||||||||||||||    | ||||||||||| ||||| ||||||||||| |||||     ||| |||||||  | ||     |  | | |     |  |||    |  || |     || |  |  | ||||   | ||| ||         ||| ||         
TCAGAAAGATAAGCGTTTCAGTGGTTCTGTTAAGCTTCCGCATATTCCTCGCCCTAAGATGAAAATCTGCATGCTCGGTGATGCTCAGCACGTTGAAGAGgttcatattcttctaactataatatatatatgcctttactataatattcatgcgaca-gttttgtttc--aaatggatt--tttttaattcaagtttaaattttt---------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GLYMA13G39270.2 (Glycine max), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
|||||| ||||||||||||||||| || || ||| |||| || ||||||||||| ||||||    | || ||||| |||||||||||||||||||||||||||        |    || | ||||     |     |  || |||   || |  |||  ||||       | ||| |  |   |||   |  | ||     ||  |     
CCAGAAGGACAAGCGTTTCAGTGGCTCTGTTAAGTTGCCTCATATTCCTCGCCCCAAGATGAAGATTTGTATGCTTGGAGATGCCCAGCACGTTGAGGAGgta--------acaataatttatgctgtagagaaccacgag-attcaatc-gtgtgcttcattgttttcctagat-attttacattagataacacctgggatgtatgctta

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GLYMA11G35450.2 (Glycine max), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 ||||| ||||||||||||||||| ||||| ||| |||| ||||| |||||||| ||||||    | |||||||| || ||||| ||||| ||||| ||||||| |  | |  |  |   |  |  || | |  ||     |||||  | ||          |     |       |  | | |   |||  || |||| ||   |     
ACAGAAGGACAAGCGTTTCAGTGGCTCCGTCAAGTTGCCCCACATCCCTCGCCCCAAGATGAAAATTTGCATGCTTGGTGATGCTCAGCATGTTGAAGAGgtatctaatttgccctattcatcgaaactctttatgttgc-catttaattag------gtgctgtagggaacccccaagtttaagaaattaacctcattgttatctt----

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GLYMA12G31040.2 (Glycine max), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgcc-ccattattgcgtaacag
|||||| ||||||||||| ||||| || || ||| |||| |||||||||||||| ||||||    | || ||||| ||||||||||| |||||||| |||||| |    || |   || ||     |||| ||| | ||    ||   |  |  ||| | | ||    | || |    || |  ||  |||    |||||  |         
CCAGAAGGACAAGCGTTTTAGTGGCTCTGTTAAGTTGCCTCACATTCCTCGCCCCAAGATGAAGATTTGTATGCTTGGAGATGCCCAACACGTTGAAGAGgtaataag-ctgatctaattatcaa-acccttgt-gcgagattttcaattgg-gtgcaataatatattgctttacagactgtgtttgcttcctttccatttata--------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: GLYMA18G02970.1 (Glycine max), 5'ss of exon 1
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 ||||| ||||||||||||||||| || || |||||||| ||||| |||||||| ||||||    | |||||||| || ||||| ||||| ||||| ||||| | |  | |  |  |   |     || | | | ||     |  |  |   ||||  | |||| ||   |||||| | | ||  || ||  |   |    |  ||     
ACAGAAGGACAAGCGTTTCAGTGGCTCTGTCAAGCTGCCCCACATCCCTCGCCCCAAGATGAAAATTTGCATGCTTGGTGATGCTCAGCATGTTGAAGAGgtctctatt-tgccatattcatcaagactcttatggattcataactattt--catgata-atta-gctccttgattgcatgttgatt-tttacggtaaagctatgt-----

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: AT2G27530.1 (Arabidopsis thaliana), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcat-gccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 || || || |||||||||||||| || |||||||| ||||| ||||||||||| || |||    | || ||||| |||||||| ||||| |||||||||||  ||    |  ||  |||  |       || |||       ||| ||  | || |     | || ||   || ||     || |||                        
ACAAAAGGATAAGCGTTTCAGTGGATCTGTGAAGCTCCCACATATTCCTCGCCCAAAAATGAAGATCTGTATGCTTGGAGATGCTCAGCATGTTGAGGAGgtgattgaaatctctatact--ttttgtgtatcttg-------tttggtttgaattggtgattgacacaaagtgtttgatgtttgttttgatag------------------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: AT1G08360.1 (Arabidopsis thaliana), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccatta-ttgcgtaacag
 || || ||||||||||||||||| || || ||| | ||||| || || || ||||| |||    | ||||||||||||||||||||||| ||||| |||||  |   |||   |  |   |       ||| ||| |      | |||     |     || | |    |||    | | | ||||  | || | |||| || | |   | 
TCAAAAGGACAAGCGTTTCAGTGGATCTGTCAAGTTACCACATATCCCCCGTCCTAAAATGAAGATCTGCATGCTCGGAGATGCCCAGCATGTTGAAGAGgtgatatatct--tttcatggaaattgatcattttgtg-----ctctgtt----tcttgtataatg-gttttgtgctcatttcatttggtggctctattagtttcatttgat

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: Vv06s0080g00400.t01 (Vitis vinifera), 5'ss of exon 5
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcag-catgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
|||||| |||||||||||||||||||| |||||| |||| ||||| |||||||| ||||||   || |||||||| || ||||| || ||||| || |||||| ||   ||    ||  |     ||   |||   | ||      ||  || || |   |||| |      | |||      ||||| |   |    || |||  |||   
CCAGAAGGACAAGCGTTTCAGTGGTTCTGTGAAGTTGCCCCACATCCCTCGCCCCAAGATGAAGGTCTGCATGCTTGGTGATGCTCAACACGTGGAAGAGgtaattgtgct---ccacttggctgcattaatggcaataaaagaagtgaaagacaagtgtcattgc------taattgaagaatatttttcaactatttttttgtttaa---

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: Vv08s0007g03340.t01 (Vitis vinifera), 5'ss of exon 3
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
||| || ||||||||||| ||||| || ||||||||||||||||| ||||| |||||||||    | |||||||| || ||||| ||||| || || ||||||  |   ||   |  ||| ||   ||  ||       | ||       |  |    |  ||          || |  | ||| |  ||        | |          
CCAAAAGGACAAGCGTTTTAGTGGGTCTGTGAAGCTGCCACACATCCCTCGTCCTAAGATGAAGATCTGCATGCTTGGTGATGCTCAGCATGTGGAAGAGgtaaatta-ctgttttgacttatctaacaaataactgagaacaaaacaataaaaattgattttgatttctcctatcattttttaatccttgattttcctgt----------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: EFJ31249 (Selaginella moellendorffii), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcatt-ttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 ||||| |||||||||||||| || || ||||||||||| |||||| | || || |||||| | |||||||||||||| ||||| ||||| || |  ||||||     |  | | |      | |      ||  |    | ||   ||      |||    || | |||                                          
GCAGAAGGACAAGCGTTTCAGCGGCTCGGTGAAGCTGCCTCACATTGCGCGGCCCAAGATGAGAGTGTGCATGCTCGGTGATGCGCAGCATGTAGGCGAGgtaaga--ttgagcgccctctctcctttagttgccggattgaatcactggtccattgcttttttgcacag------------------------------------------

upper sequence: PP1S18_121V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: EFJ34353 (Selaginella moellendorffii), 5'ss of exon 2
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag
 ||||| |||||||||||||| || || ||||||||||| |||||| | || || |||||| | |||||||||||||| ||||| ||||| || | |||||||             |  |   ||  ||  | |       | ||||||   |       || ||   |||   || | | || |  |                       
GCAGAAGGACAAGCGTTTCAGCGGCTCGGTGAAGCTGCCTCACATTGCCCGGCCCAAGATGAGAGTGTGCATGCTCGGTGATGCGCAGCATGTAGGGGAGgta-------------agattgagcgccctgtct-------ccttttgttgccggattgaatcac--tggtccgttgctttttttgcacag--------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162246277|gb|FC423635.1|FC423635
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162221293|gb|FC398493.1|FC398493
EST:     GCCNTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67703149|gb|BJ963382.1|BJ963382
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18367374|gb|BJ199457.1|BJ199457
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162262723|gb|FC438492.1|FC438492
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18369445|gb|BJ201532.1|BJ201532
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162218723|gb|FC394273.1|FC394273
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162227885|gb|FC403693.1|FC403693
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|208366587|gb|DC955635.1|DC955635
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162247317|gb|FC420281.1|FC420281
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162274816|gb|FC450843.1|FC450843
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162224670|gb|FC401918.1|FC401918
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162272548|gb|FC448525.1|FC448525
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162221294|gb|FC398494.1|FC398494
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37833111|gb|BJ591123.1|BJ591123
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162236489|gb|FC412856.1|FC412856
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37850754|gb|BJ608762.1|BJ608762
EST:     GCCNTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162227886|gb|FC403694.1|FC403694
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162263374|gb|FC438610.1|FC438610
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18373884|gb|BJ205462.1|BJ205462
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162265767|gb|FC443173.1|FC443173
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162275202|gb|FC451178.1|FC451178
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162252552|gb|FC428583.1|FC428583
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162275519|gb|FC451586.1|FC451586
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162202531|gb|FC380046.1|FC380046
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67698560|gb|BJ958793.1|BJ958793
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162262050|gb|FC437364.1|FC437364
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162235340|gb|FC412307.1|FC412307
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162266410|gb|FC443265.1|FC443265
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18352920|gb|BJ184975.1|BJ184975
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162270322|gb|FC447022.1|FC447022
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162244748|gb|FC424637.1|FC424637
EST:     GCCCTAAGATGCGCGTGTGCATGTTGGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18364325|gb|BJ196398.1|BJ196398
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37836444|gb|BJ594452.1|BJ594452
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37844462|gb|BJ602470.1|BJ602470
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37847856|gb|BJ605864.1|BJ605864
EST:     AAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: AAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18325025|gb|BJ157021.1|BJ157021
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|208354272|gb|DC902486.1|DC902486
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162221258|gb|FC398081.1|FC398081
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162246119|gb|FC423581.1|FC423581
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|208355522|gb|DC942642.1|DC942642
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37849229|gb|BJ607237.1|BJ607237
EST:     TAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: TAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162246323|gb|FC419911.1|FC419911
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162236490|gb|FC412857.1|FC412857
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162261935|gb|FC437326.1|FC437326
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37834359|gb|BJ592371.1|BJ592371
EST:     GCCNTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67693668|gb|BJ953901.1|BJ953901
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37829173|gb|BJ587185.1|BJ587185
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162270628|gb|FC446553.1|FC446553
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37841411|gb|BJ599419.1|BJ599419
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162222206|gb|FC397642.1|FC397642
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37835419|gb|BJ593431.1|BJ593431
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162244109|gb|FC422386.1|FC422386
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18332993|gb|BJ165007.1|BJ165007
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162212366|gb|FC388094.1|FC388094
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162202532|gb|FC380047.1|FC380047
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162218724|gb|FC394274.1|FC394274
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162216057|gb|FC393514.1|FC393514
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162263373|gb|FC438609.1|FC438609
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37823630|gb|BJ581696.1|BJ581696
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67575107|gb|BJ947931.1|BJ947931
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162244749|gb|FC424638.1|FC424638
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37827073|gb|BJ585085.1|BJ585085
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162277448|gb|FC452975.1|FC452975
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162205097|gb|FC381806.1|FC381806
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162217531|gb|FC393207.1|FC393207
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18375177|gb|BJ206755.1|BJ206755
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162265955|gb|FC442958.1|FC442958
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162261936|gb|FC437327.1|FC437327
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162205096|gb|FC381805.1|FC381805
EST:     GCCTTAAGATGCGCGTGTGCATGTTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162247316|gb|FC420280.1|FC420280
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162248557|gb|FC425333.1|FC425333
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67703571|gb|BJ963804.1|BJ963804
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162275520|gb|FC451587.1|FC451587
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162244108|gb|FC422385.1|FC422385
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162222205|gb|FC397641.1|FC397641
EST:     GCCNTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67570393|gb|BJ943217.1|BJ943217
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162221259|gb|FC398082.1|FC398082
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18350203|gb|BJ182254.1|BJ182254
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162275201|gb|FC451177.1|FC451177
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162264978|gb|FC441481.1|FC441481
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162271661|gb|FC448586.1|FC448586
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162238400|gb|FC417359.1|FC417359
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37851741|gb|BJ609749.1|BJ609749
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37823594|gb|BJ581660.1|BJ581660
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18353948|gb|BJ186003.1|BJ186003
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162278652|gb|FC455050.1|FC455050
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162217532|gb|FC393208.1|FC393208
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162276765|gb|FC452759.1|FC452759
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18348736|gb|BJ180785.1|BJ180785
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18356173|gb|BJ188232.1|BJ188232
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162270627|gb|FC446552.1|FC446552
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18357073|gb|BJ189132.1|BJ189132
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162211333|gb|FC387563.1|FC387563
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162278651|gb|FC455049.1|FC455049
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162210157|gb|FC386382.1|FC386382
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162217156|gb|FC392520.1|FC392520
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162248558|gb|FC425334.1|FC425334
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162246118|gb|FC423580.1|FC423580
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162246296|gb|FC419910.1|FC419910
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162262724|gb|FC438493.1|FC438493
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67718946|gb|BJ969205.1|BJ969205
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162265162|gb|FC441249.1|FC441249
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162232103|gb|FC408004.1|FC408004
EST:     AGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: AGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162247928|gb|FC424197.1|FC424197
EST:     GCCTTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162263964|gb|FC439220.1|FC439220
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|67727289|gb|BJ977548.1|BJ977548
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18373966|gb|BJ205544.1|BJ205544
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162232104|gb|FC408005.1|FC408005
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|208398340|gb|DC916451.1|DC916451
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162263965|gb|FC439221.1|FC439221
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|18344436|gb|BJ176476.1|BJ176476
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162216058|gb|FC393515.1|FC393515
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162246278|gb|FC423636.1|FC423636
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162271660|gb|FC448585.1|FC448585
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162212365|gb|FC388093.1|FC388093
EST:     ACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: ACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|162232957|gb|FC407558.1|FC407558
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|37823636|gb|BJ581702.1|BJ581702
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
EST: gi|208397430|gb|DC916356.1|DC916356
EST:     GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAG                         GCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG
genomic: GCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 125

CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctc ... tgcgtaacagGCCAACAAGATGGGCATGGAATACATGGACGTCGAGAGCTTGAAGAAAATGAACAAGAACAAGAAGCTCGTGAAGAAACTGGCGAAGAAGTACCACGCTT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCAGAAAGACAAGCGTTTCAGTGGTTCCGTGAAGCTGCCACACATTCCTCGCCCTAAGATGCGCGTGTGCATGCTCGGAGATGCCCAGCACGTTGAGGAGgtatttcctctaactcaactaatgccacccatgttgagaagcattttgtcagcatgccacattacgcaggttgattacctcttatttattcgccccattattgcgtaacag

- - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG