Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGCCGAGTATGTCGGCGTCAAGGTGGAAATCGTCCCTGATTTCCAGATGGGAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgcccgaacctgtcgttcaaatagccacaaaattataattttttttactatatttgctcacagtacaagtacattttcgatgttctctttgagtt...

Basic information

species Physcomitrella patens
transcript PP1S132_188V6.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S132_188V6.1 (Physcomitrella patens), 5'ss of exon 2
lower sequence: EFJ14564 (Selaginella moellendorffii), 5'ss of exon 2
CGCCGAGTATGTCGGCGTCAAGGTGGAAATCGTCCCTGATTTCCAGATGGGAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgcccgaacctgtcgttcaaatagccacaaaattataattttttttactatatttgctcacagtacaagtacattttcgatgttctctttgagtt
 ||||||  ||| || |||||||| ||  | || ||||||||| |||||||||||| ||||||| | |||||||| |||||| |||||||  | ||||||||                || |     |      |   |  | ||| |||||                                                
GGCCGAGATTGTGGGAGTCAAGGTCGATCTGGTTCCTGATTTCGAGATGGGAGTGAGCAACAAGACGCCCGAGTTCTTGAAGCTGAATCCGTTGGGAAAGgtgagaattttggatgagcgctgggcgatttgtga---tgaattttcttttag-----------------------------------------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18343010|gb|BJ175047.1|BJ175047
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67712629|gb|BJ966078.1|BJ966078
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208370733|gb|DC936855.1|DC936855
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100360796|gb|BY965905.1|BY965905
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67717962|gb|BJ968221.1|BJ968221
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18351326|gb|BJ183378.1|BJ183378
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100385050|gb|BY987513.1|BY987513
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67717967|gb|BJ968226.1|BJ968226
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67703907|gb|BJ964140.1|BJ964140
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100379904|gb|BY968748.1|BY968748
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67716888|gb|BJ967147.1|BJ967147
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTGTG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100413644|gb|BY974919.1|BY974919
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100384596|gb|BY987455.1|BY987455
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67701955|gb|BJ962188.1|BJ962188
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACG
EST: gi|22132786|gb|BQ827356.1|BQ827356
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|162279682|gb|FC455395.1|FC455395
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18356800|gb|BJ188859.1|BJ188859
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18359979|gb|BJ192040.1|BJ192040
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|162277016|gb|FC453738.1|FC453738
EST:     ATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: ATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208356762|gb|DC906424.1|DC906424
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCANACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100437436|gb|BY961517.1|BY961517
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|162204806|gb|FC381163.1|FC381163
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67704497|gb|BJ964730.1|BJ964730
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100361569|gb|BY984072.1|BY984072
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67716733|gb|BJ966993.1|BJ966993
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18353588|gb|BJ185643.1|BJ185643
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|7207588|gb|AW561635.1|AW561635
EST:     AGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATGCGAGAGCAACGCTATG
genomic: AGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67718587|gb|BJ968846.1|BJ968846
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|162165860|gb|FC340937.1|FC340937
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100406936|gb|BY973941.1|BY973941
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67709865|gb|BJ965681.1|BJ965681
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18349260|gb|BJ181309.1|BJ181309
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100367392|gb|BY984682.1|BY984682
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67716614|gb|BJ966874.1|BJ966874
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67703236|gb|BJ963469.1|BJ963469
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100413055|gb|BY992566.1|BY992566
EST:     GAGTGACCAACAAGCCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100444828|gb|BY982656.1|BY982656
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208383642|gb|DC907033.1|DC907033
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67702771|gb|BJ963004.1|BJ963004
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208375564|gb|DC940534.1|DC940534
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100413378|gb|BY956642.1|BY956642
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67702459|gb|BJ962692.1|BJ962692
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100398059|gb|BY954067.1|BY954067
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18352326|gb|BJ184380.1|BJ184380
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18352124|gb|BJ184178.1|BJ184178
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|19789510|gb|BQ041350.1|BQ041350
EST:     GAGTGACCAACAATTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18349445|gb|BJ181494.1|BJ181494
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18343055|gb|BJ175093.1|BJ175093
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|162238600|gb|FC418976.1|FC418976
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67704581|gb|BJ964814.1|BJ964814
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67701851|gb|BJ962084.1|BJ962084
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67701860|gb|BJ962093.1|BJ962093
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACG
EST: gi|67716486|gb|BJ966746.1|BJ966746
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67717644|gb|BJ967903.1|BJ967903
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18351726|gb|BJ183778.1|BJ183778
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGAC
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGAC
EST: gi|100400141|gb|BY990799.1|BY990799
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67703888|gb|BJ964121.1|BJ964121
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67720048|gb|BJ970307.1|BJ970307
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100371930|gb|BY967621.1|BY967621
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18347287|gb|BJ179333.1|BJ179333
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|22132787|gb|BQ827357.1|BQ827357
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67703164|gb|BJ963397.1|BJ963397
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACG
EST: gi|67719655|gb|BJ969914.1|BJ969914
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100391356|gb|BY971616.1|BY971616
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100415346|gb|BY975270.1|BY975270
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18330593|gb|BJ162599.1|BJ162599
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18355681|gb|BJ187740.1|BJ187740
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100403710|gb|BY955063.1|BY955063
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67717956|gb|BJ968215.1|BJ968215
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18374487|gb|BJ206065.1|BJ206065
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100450939|gb|CJ974516.1|CJ974516
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67717836|gb|BJ968095.1|BJ968095
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208379757|gb|DC907642.1|DC907642
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18370351|gb|BJ201953.1|BJ201953
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67709707|gb|BJ965523.1|BJ965523
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100417354|gb|BY957290.1|BY957290
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|162216578|gb|FC392475.1|FC392475
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67702655|gb|BJ962888.1|BJ962888
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACG
EST: gi|67702372|gb|BJ962605.1|BJ962605
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100409362|gb|BY991974.1|BY991974
EST:     GGGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18351811|gb|BJ183863.1|BJ183863
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18347424|gb|BJ179470.1|BJ179470
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18342989|gb|BJ175025.1|BJ175025
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100408074|gb|BY955896.1|BY955896
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGGAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100352342|gb|BY983160.1|BY983160
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208347093|gb|DC909363.1|DC909363
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67704208|gb|BJ964441.1|BJ964441
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67712544|gb|BJ965993.1|BJ965993
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18345275|gb|BJ177317.1|BJ177317
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACG-CC-AGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100376429|gb|BY986162.1|BY986162
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67701946|gb|BJ962179.1|BJ962179
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACG
EST: gi|67704428|gb|BJ964661.1|BJ964661
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67709856|gb|BJ965672.1|BJ965672
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67701819|gb|BJ962052.1|BJ962052
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18350180|gb|BJ182231.1|BJ182231
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGAC
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGAC
EST: gi|162220345|gb|FC395726.1|FC395726
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18371674|gb|BJ203276.1|BJ203276
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208368165|gb|DC931419.1|DC931419
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18355292|gb|BJ187351.1|BJ187351
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67573963|gb|BJ946787.1|BJ946787
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18364748|gb|BJ196821.1|BJ196821
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|100410406|gb|BY992090.1|BY992090
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67719374|gb|BJ969633.1|BJ969633
EST:     GAGTGACCAACAAGTCTCCCGAGTCTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|208362196|gb|DC939620.1|DC939620
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|67718568|gb|BJ968827.1|BJ968827
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18354948|gb|BJ187007.1|BJ187007
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
EST: gi|18369012|gb|BJ201097.1|BJ201097
EST:     GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAG                         GTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG
genomic: GAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 31 (upstream exon), 31 (downstream exon)
Score: 18

CGCCGAGTATGTCGGCGTCAAGGTGGAAATCGTCCCTGATTTCCAGATGGGAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgccc ... gtgtttgcagGTTCCAGTGCTTCAGACGCCCGAGGGACCCATATTCGAGAGCAACGCTATGGCTCGCTATG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CGCCGAGTATGTCGGCGTCAAGGTGGAAATCGTCCCTGATTTCCAGATGGGAGTGACCAACAAGTCTCCCGAGTTTTTGAAGATGAATCCCATTGGAAAGgtacttgcccgaacctgtcgttcaaatagccacaaaattataattttttttactatatttgctcacagtacaagtacattttcgatgttctctttgagtt

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGATG