1 5' 3' | 2 5' 3' | 3 5' 3' |
ATGTAAATTTGAAGAAAGCTACGCTGCGGCTGGAGCAAGATGAAGAAAATCCGGGTTCCTACCTGGTGGCTTTCTCTTTCGATGCTACCGTTGATGGAAGgtcagctcttatacttatcttgaccttaggattgcttattttgccgagaaatcccctctcatgatcctacaattcctcgacttcaatttctgacgattat...
species | Physcomitrella patens |
transcript | PP1S131_9V6.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCGGGTTCCTACCTGGTGGCTTTCTCTTTCGATGCTACCGTTGATGGAAG CATATGTATCTTCTTCCTCGCAAAAGAGGGTGATAACTGCTGCCTAACACCEST: gi|162169160|gb|FC345127.1|FC345127
genomic: CCGGGTTCCTACCTGGTGGCTTTCTCTTTCGATGCTACCGTTGATGGAAGgtcagctctt ... ctttgtgcagCATATGTATCTTCTTCCTCGCAAAAGAGGGTGATAACTGCTGCCTAACACC
EST: GTGGCTTTCTCTTTCGATGCTACCGTTGATGGAAG CATATGTATCTTCTTCCTCGCAAAAGAGGGTGATAACTGCTGCCTAACACC
genomic: GTGGCTTTCTCTTTCGATGCTACCGTTGATGGAAGgtcagctctt ... ctttgtgcagCATATGTATCTTCTTCCTCGCAAAAGAGGGTGATAACTGCTGCCTAACACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTAAATTTGAAGAAAGCTACGCTGCGGCTGGAGCAAGATGAAGAAAATCCGGGTTCCTACCTGGTGGCTTTCTCTTTCGATGCTACCGTTGATGGAAGgtcagctcttatacttatcttgaccttaggattgcttattttgccgagaaatcccctctcatgatcctacaattcctcgacttcaatttctgacgattat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG