1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TTCCGTGGTAACAATCAGAGGGAGTCATCGGGCGGCAGCGGATGCGAAGGAGGATGTGGAAAACCGTGTTCCATATTTGTTCCCTTCTTCACCTGCATTGgtatttcctgatcttctatttctagaattgtgtcatttttcataaaggttattgtggttgcagggtcgtctactattcattgatctgaagatgtacaaca...
species | Physcomitrella patens |
transcript | PP1S100_63V6.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGGATGTGGAAAACCGTGTTCCATATTTGTTCCCTTCTTCACCTGCATTG GATCACTAATTGTAATAGTTGGTTTCTTCCAATCGGAGCAAGCACCAATGTEST: gi|18372383|gb|BJ203985.1|BJ203985
genomic: AGGATGTGGAAAACCGTGTTCCATATTTGTTCCCTTCTTCACCTGCATTGgtatttcctg ... atatgcgcagGATCACTAATTGTAATATTTGGTTTCTTCCAATCGGAGCAAGCACCAATGT
EST: AGGATGTGGAAAACCGTGTTCCATATTTGTTCCCTTCTTCACCTGCATTG GATCACTAATTGTAATATTTGGTTTCTTCCAATCGGAGCAAGCACCAATGT
genomic: AGGATGTGGAAAACCGTGTTCCATATTTGTTCCCTTCTTCACCTGCATTGgtatttcctg ... atatgcgcagGATCACTAATTGTAATATTTGGTTTCTTCCAATCGGAGCAAGCACCAATGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCCGTGGTAACAATCAGAGGGAGTCATCGGGCGGCAGCGGATGCGAAGGAGGATGTGGAAAACCGTGTTCCATATTTGTTCCCTTCTTCACCTGCATTGgtatttcctgatcttctatttctagaattgtgtcatttttcataaaggttattgtggttgcagggtcgtctactattcattgatctgaagatgtacaaca
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