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GGTGGCCGCGACAGGAGACCTATAGGAGCATATGAGCTTGCCAAAGCAGTTCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACGgtacgggtttgctctactctttttatcagacttgtttttgtggctttcattacgtctttgtgtgccagtatgcacggcatgcaaagtcaatacaaagtgt...
species | Physcomitrella patens |
transcript | PP1S43_232V6.1 |
intron # | 16 |
splice site | 5' |
intron type | U2 |
EST: TGAACTGCATCAATTGTGACG GCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTGEST: gi|37841897|gb|BJ599905.1|BJ599905
genomic: TGAACTGCATCAATTGTGACGgtacgggttt ... ctggtcacagGCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTG
EST: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACG GCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTGEST: gi|162260812|gb|FC438168.1|FC438168
genomic: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACGgtacgggttt ... ctggtcacagGCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTG
EST: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACG GCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTGEST: gi|37850978|gb|BJ608986.1|BJ608986
genomic: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACGgtacgggttt ... ctggtcacagGCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTG
EST: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACG GCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTGEST: gi|162240841|gb|FC417512.1|FC417512
genomic: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACGgtacgggttt ... ctggtcacagGCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTG
EST: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACG GCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTGEST: gi|162227119|gb|FC402593.1|FC402593
genomic: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACGgtacgggttt ... ctggtcacagGCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTG
EST: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACG GCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTG
genomic: TCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACGgtacgggttt ... ctggtcacagGCCAAGGGCAAGGATTCGACATCAACCTTGTGAAGCTTGTATCGGACGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGGCCGCGACAGGAGACCTATAGGAGCATATGAGCTTGCCAAAGCAGTTCAAGATCTTGGTGCTGGGGAAATTCTCTTGAACTGCATCAATTGTGACGgtacgggtttgctctactctttttatcagacttgtttttgtggctttcattacgtctttgtgtgccagtatgcacggcatgcaaagtcaatacaaagtgt
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