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AAGCCAGACTATGCTCGGTGTGTATCCATCGTTGCGGCTGCGTCTCTCCGTGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaactttattacgatgttgttgagctagttctcaagtggttgaacaatccttggatactgctttctcgtctgtggtattcaagaacagcgtttc...
species | Physcomitrella patens |
transcript | PP1S105_42V6.2 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: AGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|162189732|gb|FC366786.1|FC366786
genomic: AGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGACTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|37839867|gb|BJ597875.1|BJ597875
genomic: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGGCAGTCATCTCTCCAATNGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|37842791|gb|BJ600799.1|BJ600799
genomic: TGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|162185003|gb|FC362449.1|FC362449
genomic: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
genomic: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCCAGACTATGCTCGGTGTGTATCCATCGTTGCGGCTGCGTCTCTCCGTGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaactttattacgatgttgttgagctagttctcaagtggttgaacaatccttggatactgctttctcgtctgtggtattcaagaacagcgtttc
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