Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGGAGAGATTCATCGGCAGAATGGTTACTGCTCTGAGTGATCCAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactactgccttcactaagctaattattatgtgtgtgacaaacaaatgaaacttgaaatgcgttttcgtaatcttcatgcatgcaacgggctgtacagttgccgtgtaatgttcccatgttcttcaaattttgcttatgtaattggaattgtggtatgtgctgcag

Basic information

species Physcomitrella patens
transcript PP1S259_126V6.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208362855|gb|DC950805.1|DC950805
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208365873|gb|DC947755.1|DC947755
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208354504|gb|DC953868.1|DC953868
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208386860|gb|DC953513.1|DC953513
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208371335|gb|DC944499.1|DC944499
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208368949|gb|DC955034.1|DC955034
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208375077|gb|DC956445.1|DC956445
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208371762|gb|DC951796.1|DC951796
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208355378|gb|DC949858.1|DC949858
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208362144|gb|DC954311.1|DC954311
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67720675|gb|BJ970934.1|BJ970934
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208351103|gb|DC921349.1|DC921349
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67720645|gb|BJ970904.1|BJ970904
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208358571|gb|DC946532.1|DC946532
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67725270|gb|BJ975529.1|BJ975529
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208373640|gb|DC952465.1|DC952465
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208366254|gb|DC943814.1|DC943814
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208366010|gb|DC951183.1|DC951183
EST:     GCGCCATCTGGATCTCCTACATGTNTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: GCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208367547|gb|DC955699.1|DC955699
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208353738|gb|DC949772.1|DC949772
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208361562|gb|DC950292.1|DC950292
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208389599|gb|DC945823.1|DC945823
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208387246|gb|DC945545.1|DC945545
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67723866|gb|BJ974125.1|BJ974125
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208391971|gb|DC949434.1|DC949434
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208382500|gb|DC923170.1|DC923170
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67723400|gb|BJ973659.1|BJ973659
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208353564|gb|DC946344.1|DC946344
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|37824503|gb|BJ582569.1|BJ582569
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208358965|gb|DC950142.1|DC950142
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67724238|gb|BJ974497.1|BJ974497
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208369883|gb|DC944249.1|DC944249
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208381292|gb|DC919182.1|DC919182
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208392829|gb|DC957096.1|DC957096
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67722009|gb|BJ972268.1|BJ972268
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67724236|gb|BJ974495.1|BJ974495
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208360610|gb|DC957849.1|DC957849
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208359304|gb|DC954199.1|DC954199
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208362640|gb|DC943783.1|DC943783
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208388440|gb|DC957050.1|DC957050
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208400316|gb|DC924954.1|DC924954
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67726169|gb|BJ976428.1|BJ976428
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208369250|gb|DC944567.1|DC944567
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCACCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208346009|gb|DC921254.1|DC921254
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGGGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208368881|gb|DC947439.1|DC947439
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67720132|gb|BJ970391.1|BJ970391
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208394053|gb|DC957134.1|DC957134
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208356029|gb|DC946203.1|DC946203
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208372589|gb|DC944596.1|DC944596
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTNTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67721552|gb|BJ971811.1|BJ971811
EST:     CTCCTACATGTCTCAG                         TGTGACAAGACTCTNGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67726447|gb|BJ976706.1|BJ976706
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208391916|gb|DC949379.1|DC949379
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208372250|gb|DC948053.1|DC948053
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208366641|gb|DC955661.1|DC955661
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67720905|gb|BJ971164.1|BJ971164
EST:     TACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: TACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208368096|gb|DC947656.1|DC947656
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67728284|gb|BJ978543.1|BJ978543
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208362514|gb|DC943741.1|DC943741
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|37830045|gb|BJ588057.1|BJ588057
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208369879|gb|DC944245.1|DC944245
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208361228|gb|DC957697.1|DC957697
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208349007|gb|DC921695.1|DC921695
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208353341|gb|DC946289.1|DC946289
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208361060|gb|DC946693.1|DC946693
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208397218|gb|DC920861.1|DC920861
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208365847|gb|DC955450.1|DC955450
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208396763|gb|DC924347.1|DC924347
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67726352|gb|BJ976611.1|BJ976611
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208386921|gb|DC956918.1|DC956918
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67725837|gb|BJ976096.1|BJ976096
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67728022|gb|BJ978281.1|BJ978281
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67727088|gb|BJ977347.1|BJ977347
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208365798|gb|DC947736.1|DC947736
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|37824007|gb|BJ582073.1|BJ582073
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67728208|gb|BJ978467.1|BJ978467
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208394129|gb|DC957210.1|DC957210
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67725278|gb|BJ975537.1|BJ975537
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|67727860|gb|BJ978119.1|BJ978119
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGTATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|37837585|gb|BJ595593.1|BJ595593
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208377437|gb|DC927083.1|DC927083
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208386251|gb|DC952964.1|DC952964
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208368387|gb|DC955556.1|DC955556
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208364353|gb|DC950654.1|DC950654
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
EST: gi|208360763|gb|DC946473.1|DC946473
EST:     CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAG                         TGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA
genomic: CAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 25 (upstream exon), 35 (downstream exon)
Score: 23

GCAGGAGAGATTCATCGGCAGAATGGTTACTGCTCTGAGTGATCCAAGGTTGACGCATGAAATCCGCGCCATCTGGATCTCCTACATGTCTCAGgtacactact ... tgtgctgcagTGTGACAAGACTCTGGGACAGAAGCTGGCATCTCGTCTCAGCACAAGAGCAACAATGTAGAGAAGTCTCAAAGGTCTGGTCACGAAGAACCCCATCGAAT




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