Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162255347|gb|FC432073.1|FC432073EST: TGGCGTTACTGCTGCACCCTAAAACCCTCATCTTCCCTAG GTAAACCAAGATGGGTAAGGAGAAGGTTCACATTAACATCGTGGTCATCGG
genomic: TGGCGTTACTGCTGCACCCTAAAACCCTCATCTTCCCTAGgtaaggtttc ... ctttttgcagGTAAACCAAGATGGGTAAGGAGAAGGTTCACATTAACATCGTGGTCATCGG
EST:
gi|162174979|gb|FC350878.1|FC350878EST: GTGGATACGGTGGCGTTACTGCTGCACACTAAAACCCTCATCTTCCCTAG GTAAACCAAGATGGGTAAGGAGAAGGTTCACATTAACATCGTGGTCATCGG
genomic: GTGGATACGGTGGCGTTACTGCTGCACCCTAAAACCCTCATCTTCCCTAGgtaaggtttc ... ctttttgcagGTAAACCAAGATGGGTAAGGAGAAGGTTCACATTAACATCGTGGTCATCGG
EST:
gi|18326358|gb|BJ158357.1|BJ158357EST: GTGGATACGGGGGCGTTACTGCTGCACCCTAAAACCCTCATNTTCCCTAG GTAAACCAAGATGGGTAAGGAGAAGGTTCACATTAACATCGNGGTCATCGG
genomic: GTGGATACGGTGGCGTTACTGCTGCACCCTAAAACCCTCATCTTCCCTAGgtaaggtttc ... ctttttgcagGTAAACCAAGATGGGTAAGGAGAAGGTTCACATTAACATCGTGGTCATCGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTCTCTTCCACACACTCTACTGTCTCTCTCTCCCCCCCCCCCACCTTTGCGTGGATACGGTGGCGTTACTGCTGCACCCTAAAACCCTCATCTTCCCTAGgtaaggtttctgtttctgtaccggcttctgtcttggcgtgtgctgtagctcctgcaatcctgtttgattgtgctactgtgacccgtagctttcggtttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC