1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ACGCTCGATTTCTCGCCGCGGACGTTGCTCGACACTCACTGGAAGCTTGGATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAGgtatagtcgaggctctcactttattttgcatatcgccatagccagatttggtacatgtgtttgtgtgtgccgtgcgtggtttggtttagttgtggttgga...
species | Physcomitrella patens |
transcript | PP1S7_156V6.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAG GCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAGEST: gi|67703099|gb|BJ963332.1|BJ963332
genomic: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAGgtatagtcga ... ttatttacagGCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAG
EST: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAG GCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAGEST: gi|67701897|gb|BJ962130.1|BJ962130
genomic: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAGgtatagtcga ... ttatttacagGCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAG
EST: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAG GCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAGEST: gi|67704359|gb|BJ964592.1|BJ964592
genomic: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAGgtatagtcga ... ttatttacagGCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAG
EST: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAG GCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAGEST: gi|67703488|gb|BJ963721.1|BJ963721
genomic: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAGgtatagtcga ... ttatttacagGCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAG
EST: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAG GCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAG
genomic: ATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAGgtatagtcga ... ttatttacagGCATGGCTCGCAAGAAAATCCGAGAGTATGACTCCAAGCGCATCCTGAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACGCTCGATTTCTCGCCGCGGACGTTGCTCGACACTCACTGGAAGCTTGGATCCTGCTGGTTTGCGCCACGCGGGGATCTTTAAGATCTTTTTTGAGGAGgtatagtcgaggctctcactttattttgcatatcgccatagccagatttggtacatgtgtttgtgtgtgccgtgcgtggtttggtttagttgtggttgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG