Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18326144|gb|BJ158143.1|BJ158143EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
EST:
gi|67574984|gb|BJ947808.1|BJ947808EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
EST:
gi|18371398|gb|BJ203000.1|BJ203000EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
EST:
gi|67574664|gb|BJ947488.1|BJ947488EST: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAA ATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
genomic: GGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtcttt ... ttggcttcagATCACGTCGGACTTGGAAACCCAATGTGCAAACGAAACGGATTTTTAGTTT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGTCTGCGGCCAGAGTGGTGATGGGACGCGCCAAGCGTGGCTTGTACGCAGGTCGTCATATTCAATTCGGGAATCAAGTCAGTGAAGACGGTGGCAACAAgtgagtctttgtcgtcttgggggtgttgaagctgttttcttttttcagttcgttcgtgattgttgtaagcagtattccagtttgtgtatggaatggttttcgatgcagaatcattgttggattttggtgcttggagatgttttcagtggtgggtactttgtggactttggttttggcttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA