Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18366908|gb|BJ198988.1|BJ198988EST: TGGCGGTTGATCAGAATTCGGCGAGCAAGTTTGCGCAGAGCAGCTTTTGA GGAGCGATCCACAAAGATGTTGGACCCGTCTCCGTCGCTGCTGAGCCGCAG
genomic: TGGCGGTTGATCAGAATTCGGCGAGCAAGTTTGCGCAGAGCAGCTTTTGAgtaagtaaga ... aactgggcagGGAGCGATCCACAAAGATGTTGGACCCGTCTCCGTCGCTGCTGAGCCGCAG
EST:
gi|18372889|gb|BJ204491.1|BJ204491EST: TGGCGGTTGATCAGAATTCGGCGAGCAAGTTTGCGCAGAGCAGCTTTTGA GGAGCGATCCACAAAGATGTTGGACCCGTCTCCGTCGCTGCTGAGCCGCAG
genomic: TGGCGGTTGATCAGAATTCGGCGAGCAAGTTTGCGCAGAGCAGCTTTTGAgtaagtaaga ... aactgggcagGGAGCGATCCACAAAGATGTTGGACCCGTCTCCGTCGCTGCTGAGCCGCAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAGATGTTGTCTAGACAGCTAGTTTCTCTGCTGTTTGGTTGGTGAAGTGTTGGCGGTTGATCAGAATTCGGCGAGCAAGTTTGCGCAGAGCAGCTTTTGAgtaagtaagattcaacctacaccagaagattccatgagtttgttgatgtgtcgcgttctggaatcgtatgatgttgctgggtaagtctaatgagctactc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT