Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18373911|gb|BJ205489.1|BJ205489EST: GTATTGATTTGGGTACCACGAACTCGTGCGTGGCCGTGATGGAGGGCAAG ATGCCACGCGTGATTGAGAATTCCGAGGGTGCTCGCACGACACCATCCGTG
genomic: GTATTGATTTGGGTACCACGAACTCGTGCGTGGCCGTGATGGAGGGCAAGgtgagtcttt ... gaactagcagATGCCACGCGTGATTGAGAATTCCGAGGGTGCTCGCACGACACCATCCGTG
EST:
gi|18348868|gb|BJ180917.1|BJ180917EST: GTATTGATTTGGGTACCACGAACTCGTGCGTGGCCGTGATGGAGGGCAAG ATGCCACGCGTGATTGAGAATTCCGAGGGTGCTCGCACGACACCATCCGTG
genomic: GTATTGATTTGGGTACCACGAACTCGTGCGTGGCCGTGATGGAGGGCAAGgtgagtcttt ... gaactagcagATGCCACGCGTGATTGAGAATTCCGAGGGTGCTCGCACGACACCATCCGTG
EST:
gi|18351436|gb|BJ183488.1|BJ183488EST: GTATTGATTTGGGTACCACGAACTCGTGCGTGGCCGTGATGGAGGGCAAG ATGCCACGCGTGATTGAGAATTCCGAGGGTGCTCGCACGACACCATCCGTG
genomic: GTATTGATTTGGGTACCACGAACTCGTGCGTGGCCGTGATGGAGGGCAAGgtgagtcttt ... gaactagcagATGCCACGCGTGATTGAGAATTCCGAGGGTGCTCGCACGACACCATCCGTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GACGGGGAGGGCTCTGTACAGCTCCAAGGGAGCGGGCAGCGATGTCATCGGTATTGATTTGGGTACCACGAACTCGTGCGTGGCCGTGATGGAGGGCAAGgtgagtctttttttcccctttctttctgcttcttccagttagggttgggttggtctgcgatgggtgggagaattggtttcagagtgaatcttttcggtta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG