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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCCTGAGCTCGCTGCTCCAGTTCAAGCTTCCCTGTGTCGAAGCACCTGCAACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatcccttcatgtcattgtggtcttcgtctgcattgctccagctcagggttgagagagtatcatgtgccactgtcacgagactttgtggaactg...

Basic information

species Physcomitrella patens
transcript PP1S55_167V6.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|100433131|gb|BY978826.1|BY978826
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208349092|gb|DC909875.1|DC909875
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100371197|gb|BY985986.1|BY985986
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208345559|gb|DC909249.1|DC909249
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100400403|gb|BY954459.1|BY954459
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100372137|gb|BY967723.1|BY967723
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208348370|gb|DC905556.1|DC905556
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100422855|gb|BY958034.1|BY958034
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100373167|gb|BY949242.1|BY949242
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100383977|gb|BY987234.1|BY987234
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100367246|gb|BY984857.1|BY984857
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGTAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100394358|gb|BY972029.1|BY972029
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208348321|gb|DC905535.1|DC905535
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|67717621|gb|BJ967880.1|BJ967880
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCA
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCA
EST: gi|100385441|gb|BY969778.1|BY969778
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100388354|gb|BY951956.1|BY951956
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100441677|gb|BY962768.1|BY962768
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208346761|gb|DC913042.1|DC913042
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208347235|gb|DC909682.1|DC909682
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208347552|gb|DC912825.1|DC912825
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100385841|gb|BY951035.1|BY951035
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100387098|gb|BY951497.1|BY951497
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100450653|gb|CJ974371.1|CJ974371
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208345507|gb|DC909197.1|DC909197
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100386122|gb|BY970061.1|BY970061
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100385872|gb|BY951066.1|BY951066
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100405967|gb|BY991473.1|BY991473
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100390736|gb|BY971491.1|BY971491
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100354895|gb|BY983620.1|BY983620
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208344844|gb|DC912678.1|DC912678
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100398019|gb|BY954047.1|BY954047
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100437088|gb|BY961345.1|BY961345
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100366092|gb|BY967275.1|BY967275
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100388851|gb|BY988727.1|BY988727
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100436993|gb|BY979629.1|BY979629
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100383890|gb|BY987147.1|BY987147
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100393768|gb|BY953504.1|BY953504
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208380464|gb|DC914888.1|DC914888
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGAGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|208392309|gb|DC907856.1|DC907856
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100359278|gb|BY965668.1|BY965668
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
EST: gi|100360178|gb|BY966059.1|BY966059
EST:     ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAA                         GTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT
genomic: ACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatc ... tgtcgagcagGTTTGCGAGGATGGGGATTGCTCGCAGGAGATCAGCGCTTCTGCTCCTCCT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCCTGAGCTCGCTGCTCCAGTTCAAGCTTCCCTGTGTCGAAGCACCTGCAACTCTCGGAGCTCCCCTTGCGGTGCGAGGAAGAACCCTGACCAATACCAAgtgagacatcccttcatgtcattgtggtcttcgtctgcattgctccagctcagggttgagagagtatcatgtgccactgtcacgagactttgtggaactg

- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAC