Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|67717349|gb|BJ967608.1|BJ967608EST: TTTTGACAGATTGGTGGAGTGTTGCAATGCGACAATCAGCTGTTCAATAA CAGGTCGAATCAACCCACCGTGAAAGTGTTGCCCTTGGGTGTTCGTAACCC
genomic: TTTTGACAGATTGGTGGAGTGTTGCAATGCGACAATCAGCTGTTCAATAAgtgaggaagt ... ttttttgcagCAGGTCGAATCAACCCACCGTGAAAGTGTTGCCCTTGGGTGTTCGTAACCC
EST:
gi|100380102|gb|BY968848.1|BY968848EST: TTTTGACAGATTGGTGGAGTGTTGCAATGCGACAATCAGCTGTTCAATAA CAGGTCGAATCAACCCACCGTGAAAGTGTTGCCCTTGGGTGTTCGTAACCC
genomic: TTTTGACAGATTGGTGGAGTGTTGCAATGCGACAATCAGCTGTTCAATAAgtgaggaagt ... ttttttgcagCAGGTCGAATCAACCCACCGTGAAAGTGTTGCCCTTGGGTGTTCGTAACCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGCTGCTCCCAGTTTGTTCGTTTCGTGAAGGTTGATTCGCGGTGCTGCCGTTTTGACAGATTGGTGGAGTGTTGCAATGCGACAATCAGCTGTTCAATAAgtgaggaagtctcagagttgtgatcgttcgtctatctacttttggaaccggcttcatttataaagggtttcaattcggtaggagctattcgtagagatcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT