Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18374636|gb|BJ206214.1|BJ206214EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG GTAACAGCGAGGGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... attccattagGTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
EST:
gi|67570207|gb|BJ943031.1|BJ943031EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAAC--- G----AGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... attccattagGTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
EST:
gi|18328592|gb|BJ160597.1|BJ160597EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG GTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... attccattagGTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
EST:
gi|100445902|gb|CJ970201.1|CJ970201EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG GTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... attccattagGTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
EST:
gi|67720034|gb|BJ970293.1|BJ970293EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG GTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... attccattagGTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
EST:
gi|18371273|gb|BJ202875.1|BJ202875EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG GTAACAGCGAGGGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... attccattagGTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
EST:
gi|18343174|gb|BJ175212.1|BJ175212EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG GTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... attccattagGTAACAGCGAGAGAAGTGGAGAGAGTGAACACCTGACCATCTATTTTCGTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCGTTGAAGGTTGGATAAAGAGCGTGCAGGGCGTCTGTTTTAGTTCCGTTTATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagtgttcttttcttctcgtttttttgtttttgtttttgtttatactacggttctccgtgttgtcgccggcttttgtgccagatctatgtgctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG