Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|67704241|gb|BJ964474.1|BJ964474EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG CATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... ttggttgcagCATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
EST:
gi|100440317|gb|BY962172.1|BY962172EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG CATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... ttggttgcagCATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
EST:
gi|100436892|gb|BY979578.1|BY979578EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG CATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... ttggttgcagCATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
EST:
gi|18347737|gb|BJ179784.1|BJ179784EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG CATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... ttggttgcagCATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
EST:
gi|162273013|gb|FC449144.1|FC449144EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG CATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... ttggttgcagCATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
EST:
gi|18353733|gb|BJ185788.1|BJ185788EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG CATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... ttggttgcagCATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
EST:
gi|18355523|gb|BJ187582.1|BJ187582EST: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAG CATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
genomic: TATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagt ... ttggttgcagCATCGACTGATTGTCAGGGTGTATGTCATCCTTTTCGTTCGGGGAAGCTCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CCGTTGAAGGTTGGATAAAGAGCGTGCAGGGCGTCTGTTTTAGTTCCGTTTATTGTGAGTTCTACCTGCAGCGGGCCCTGCTCAGGCGGGTCAGAACGAGgtaagccagtgttcttttcttctcgtttttttgtttttgtttttgtttatactacggttctccgtgttgtcgccggcttttgtgccagatctatgtgctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG