Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|37845238|gb|BJ603246.1|BJ603246EST: AGCGCTGCTATTGTAAAGAAAGGTGAAATCAAGATGTGTAAAGCCTTCAG GTATTTTGAACTTCCCAAGTGTGTAGACGCTGAGCTATTAGCGCATCCGCT
genomic: AGCGCTGCTATTGTAAAGAAAGGTGAAATCAAGATGTGTAAAGCCTTCAGgtatgtgagt ... ttcgctctagGTATTTTGAACTTCCCAAGTGTGTAGACGCTGAGCTATTAGCGCATCCGCT
EST:
gi|37840583|gb|BJ598591.1|BJ598591EST: AAAGAAAGGTGAAATCAAGGATGTGTAAAGCCTTCAG GTATTTTGAACTTCCCAAGGTGTGTAGACGCTGAGCTATTAGCGCATCCGC
genomic: AAAGAAAGGTGAAATCAA-GATGTGTAAAGCCTTCAGgtatgtgagt ... ttcgctctagGTATTTTGAACTTCCCAA-GTGTGTAGACGCTGAGCTATTAGCGCATCCGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CAGGGATGCAGCTCGCAATTAAGGTGCAACGAGCTTGTATGAGTATTGGTAGCGCTGCTATTGTAAAGAAAGGTGAAATCAAGATGTGTAAAGCCTTCAGgtatgtgagtcttcacaggaacacccagtaactgatgaaactatggtactttgtagattgctttatttgtgtaataatatacgttccaactgtatttccgaagtggcatggggtatctccagctcaagctttataacgcactctgtttcgtgaaattgagtagcaccctctaacccattcacttgcgaacttcgctctag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG