1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GATCACGCTCTCCTTCCATCGCAATCTGTCACACAAAAGCTTCAAGCTCCCCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAGgtttgttttataactttggcttacgttgcctcggcacgatcggtgtttacatctcttaatgaatttatgatacggtgccgctggaattgattaggtcagg...
species | Physcomitrella patens |
transcript | PP1S495_13V6.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: C-AAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAG GGTGATCCATTGAAGTGGGTAAGCTCACATCGGTATCACCEST: gi|162231669|gb|FC408262.1|FC408262
genomic: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAGgtttgtttta ... tctggtgcagGGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATCACC
EST: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAG GGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATCACCACCAGCATTGTEST: gi|162171757|gb|FC348426.1|FC348426
genomic: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAGgtttgtttta ... tctggtgcagGGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATCACCACCAGCATTGT
EST: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAG GGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATCACCACCAGCATTGTEST: gi|208388169|gb|DC941752.1|DC941752
genomic: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAGgtttgtttta ... tctggtgcagGGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATCACCACCAGCATTGT
EST: CCAAGTGGTTGGAGTACTCTTTCNCGTATTGTGGANTCCAANCNGTCCAG GGTGATCCATNGGANTGGGTAANCTCACATCNGTATCEST: gi|22133439|gb|BQ827736.1|BQ827736
genomic: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAGgtttgtttta ... tctggtgcagGGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATC
EST: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAG GGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATCACCACCAGCATTGT
genomic: CCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAGgtttgtttta ... tctggtgcagGGTGATCCATTGGAGTGGGTAAGCTCACATCGGTATCACCACCAGCATTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATCACGCTCTCCTTCCATCGCAATCTGTCACACAAAAGCTTCAAGCTCCCCAAGTGGTTGGAGTACTCTTTCGCGTATTGTGGAGTCCAAGCGGTCCAGgtttgttttataactttggcttacgttgcctcggcacgatcggtgtttacatctcttaatgaatttatgatacggtgccgctggaattgattaggtcagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG