Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100389362|gb|BY971112.1|BY971112EST: GCTGTATGCGGATGTGTCGAGAGAGGTAAAATTTCGTAGGTGTTTGCAAG TGTTTTTCAGAATTCGCAGAGTTTGAGGGGGCGGGGTTGACGCGATGGGGT
genomic: GCTGTATGCGGATGTGTCGAGAGAGGTAAAATTTCGTAGGTGTTTGCAAGgtaggctttg ... attgatgcagTGTTTTTCAGAATTCGCAGAGTTTGAGGGGGCGGGGTTGACGCGATGGGGT
EST:
gi|162230082|gb|FC406022.1|FC406022EST: GCGGATGTGTCGAGAGAGGTAAAATTTCGTAGGTGTTTGC-A- --------AGAATTCGCAGAGTTTGAGGGGGCGGGGTTGACGCGATGGGGT
genomic: GCGGATGTGTCGAGAGAGGTAAAATTTCGTAGGTGTTTGCAAGgtaggctttg ... attgatgcagTGTTTTTCAGAATTCGCAGAGTTTGAGGGGGCGGGGTTGACGCGATGGGGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGCTGGAGTGCTGGTGGTCTCGTTCCCTTCCCTTCCTCCCTGCTGTGGCTGCTGTATGCGGATGTGTCGAGAGAGGTAAAATTTCGTAGGTGTTTGCAAGgtaggctttgaatttcgagtggacttgcgtgtgtttgtgacgagcccagtgtttcggttgttgacgtgggcgaagaatgtggtgaggcgagctgtgtctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG