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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAATGCGAGTTGATCCACGGGCGATGGGCTATGTTGGCCATCTTGGGAGCTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagtaacatgctgcgtgtgtggggttgcattggatgcatggttttgctcggtcgagggttagagggagtaatattgttatgcgcgaggatgcagg...

Basic information

species Physcomitrella patens
transcript PP1S472_14V6.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S472_14V6.1 (Physcomitrella patens), 5'ss of exon 1
lower sequence: GLYMA01G28810.1 (Glycine max), 5'ss of exon 1
GGAATGCGAGTTGATCCACGGGCGATGGGCTATGTTGGCCATCTTGGGAGCTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagtaacatgctgcgtgtgtggggttgcattggatgcatggttttgctcggtcgagggttagagggagtaatattgttatg-cgcgaggatgcagg---
 || |||||| | || |||||| | ||||| ||| | ||||   | ||||||||  | || |||    |||| ||||| |||||||| ||||||||||||||||||  |    |||||     |     ||  |||   |  || ||||      |  || | | | |   ||  || |  | ||  | | |   | |  |   
CGAGTGCGAGCTCATTCACGGGAGGTGGGCCATGCTCGCCACTCTCGGAGCTCTCACTGTTGAGTGGCTCACTGGTGTTACATGGCAAGACGCCGGAAAGgtacgg--ttctctgctgttatcgaacatttctattt--tctatcgtttgatgatgatgatgatgataattagagatctgataataacacaatacttctagtac

upper sequence: PP1S472_14V6.1 (Physcomitrella patens), 5'ss of exon 1
lower sequence: GLYMA03G08280.1 (Glycine max), 5'ss of exon 1
GGAATGCGAGTTGATCCACGGGCGATGGGCTATGTTGGCCATCTTGGGAGCTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacgga--------gtaacatgctgcgtgtgtggggttgcattggatgcatggttttgctcggtcgagggttagagggagtaatattgttat-gcgcgaggatgcagg
 || |||||  | ||||| ||  | ||||| ||| | ||||   | ||||||||  | || |||    |||| ||||| |||||||| ||||||||||||||||||         || || |  |       |   |||     | ||   |  |||   ||| | || | | | |   ||  || |  | ||  | |           
TGAGTGCGAACTCATCCATGGAAGGTGGGCCATGCTCGCCACTCTCGGAGCTCTCACTGTTGAGTGGCTCACTGGTGTTACATGGCAAGACGCCGGAAAGgtacggttctctgctgtgacttcttttccccctccagttattgggcatttctactttctatcgtttgatgatgataattagagatctgataatcacacac---------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208374462|gb|DC941191.1|DC941191
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208359121|gb|DC930453.1|DC930453
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGNCAGGACGCCAGAAAG                         GTTGAACTGGTANATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208356696|gb|DC902528.1|DC902528
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCACTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208344913|gb|DC909024.1|DC909024
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208363275|gb|DC935470.1|DC935470
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCANGACNCCNGAAAG                         GTTGAACTGGTANATGGANCGTCNTACTTCNGACTTCCACTGCCATTCANC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208344490|gb|DC905051.1|DC905051
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162168674|gb|FC343936.1|FC343936
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCANGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|67719888|gb|BJ970147.1|BJ970147
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208346835|gb|DC901577.1|DC901577
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|67710134|gb|BJ965866.1|BJ965866
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|67573685|gb|BJ946509.1|BJ946509
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162249745|gb|FC427561.1|FC427561
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208361753|gb|DC934993.1|DC934993
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162236028|gb|FC412187.1|FC412187
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|100371736|gb|BY948782.1|BY948782
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGANAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|100370800|gb|BY948522.1|BY948522
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGANAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|100385730|gb|BY987795.1|BY987795
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGANAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208391036|gb|DC929355.1|DC929355
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCANGACGCCGGAAAG                         GTTGAACTGGTANATGGANCGTCNTACTTCNGACTTCCACTGCCATTCANC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208366819|gb|DC940133.1|DC940133
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162230117|gb|FC406265.1|FC406265
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGANAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|100394484|gb|BY972088.1|BY972088
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTC
EST: gi|208373554|gb|DC941109.1|DC941109
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162223044|gb|FC399961.1|FC399961
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162269918|gb|FC445929.1|FC445929
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208348885|gb|DC909964.1|DC909964
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTANATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCA-C
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|37823433|gb|BJ581499.1|BJ581499
EST:     TTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: TTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208356300|gb|DC902252.1|DC902252
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208372109|gb|DC940291.1|DC940291
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208383971|gb|DC907362.1|DC907362
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162239999|gb|FC414863.1|FC414863
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208356687|gb|DC902519.1|DC902519
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAAATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|67718231|gb|BJ968490.1|BJ968490
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162150036|gb|FC326567.1|FC326567
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGANAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208380500|gb|DC914917.1|DC914917
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|208353931|gb|DC914085.1|DC914085
EST:     CTCTGTCNGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
EST: gi|162269220|gb|FC445790.1|FC445790
EST:     CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAG                         GTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC
genomic: CTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 237

GGAATGCGAGTTGATCCACGGGCGATGGGCTATGTTGGCCATCTTGGGAGCTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagta ... ggacgtgcagGTTGAACTGGTAGATGGAGCGTCGTACTTCGGACTTCCACTGCCATTCAGCATCACCAGCTTGGTGTACATCGAGGCGTTTTTGGTGGGATTCATCGAGT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGAATGCGAGTTGATCCACGGGCGATGGGCTATGTTGGCCATCTTGGGAGCTCTGTCGGTGGAGGCCTTCACCGGTGTGACATGGCAGGACGCCGGAAAGgtacggagtaacatgctgcgtgtgtggggttgcattggatgcatggttttgctcggtcgagggttagagggagtaatattgttatgcgcgaggatgcagg

- - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG