Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162169444|gb|FC345800.1|FC345800EST: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGC GTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
genomic: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGCgtatgtcaca ... tgatatccagGTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
EST:
gi|162200182|gb|FC376054.1|FC376054EST: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGC GTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
genomic: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGCgtatgtcaca ... tgatatccagGTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
EST:
gi|18358091|gb|BJ190150.1|BJ190150EST: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGC GTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
genomic: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGCgtatgtcaca ... tgatatccagGTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
EST:
gi|162236712|gb|FC413391.1|FC413391EST: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGC GTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
genomic: GATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGCgtatgtcaca ... tgatatccagGTTACAGCAGGGCGAATATCGCAGCTTAGATACAAGGGTAATAATTTTGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACTGATTGCTGCAGTAGTCACAACCACTTCACTGCTGTAAAAGTTCAGACGATTTGCGGACTTGGAGTTCAACGAAGCAACTGCCGACATACTCCGAAGCgtatgtcacagtgtgcttttccgtagcttcaagtttgcaacatgagtgtttttctccaagcgtcctggccaagatgcagtctgcgtgatcgtggctgttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA