Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|162249451|gb|FC424056.1|FC424056EST: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAA---G ACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
genomic: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctc ... cattcaacagACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
EST:
gi|67570609|gb|BJ943433.1|BJ943433EST: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAA---G ACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
genomic: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctc ... cattcaacagACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
EST:
gi|162237518|gb|FC413003.1|FC413003EST: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAA---G ACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
genomic: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctc ... cattcaacagACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
EST:
gi|162269315|gb|FC445833.1|FC445833EST: GTTTTCTCGATTGAATGTAGGATAGTCTAAGGTG ACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
genomic: GTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctc ... cattcaacagACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
EST:
gi|162249452|gb|FC424057.1|FC424057EST: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAA---G ACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
genomic: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctc ... cattcaacagACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
EST:
gi|67693894|gb|BJ954127.1|BJ954127EST: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAA---G ACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
genomic: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctc ... cattcaacagACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
EST:
gi|100426000|gb|BY977227.1|BY977227EST: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTG ACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
genomic: ATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctc ... cattcaacagACATGACAGAAGCGGAATCAGTGATCAAAACTTGTAAGCGCTGTAAGGCAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACTTCTGAGTTCTTCTAAGCTTTGATCGAGTCTCGATTGTTGCGAATTTTATCCAAGTGTCTGGAGGTTTTCTCGATTGAATGTAGGATAGTCTAAGGTGgtgagtgctcagcctgttttcggaattgtcttcgcatttcttctgttttcgacaaggattgtatgttgcgagagggaaatgtgtgtcgtttgaactctgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG