Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18359309|gb|BJ191369.1|BJ191369EST: CAGCGTCGCGATGGATCCTCAACACCAAGCAGTACGTACTCCTCAACGTG ATTTATGCCAAAGAGCAAAAGGACGTTCCAGACTGGATGAAGGCTCACCAC
genomic: CAGCGTCGCGATGGATCCTCAACACCAAGCAGTACGTACTCCTCAACGTGgtgattcttt ... acttacgcagATTTATGCCAAAGAGCAAAAGGACGTTCCAGACTGGATGAAGGCTCACCAC
EST:
gi|18373904|gb|BJ205482.1|BJ205482EST: CAGCGTCGCGATGGATCCTCAACACCAAGCAGTACGTACTCCTCAACGTG ATTTATGCCAAAGAGCAAAAGGACGTTCCAGACTGGATGAAGGCTCACCAC
genomic: CAGCGTCGCGATGGATCCTCAACACCAAGCAGTACGTACTCCTCAACGTGgtgattcttt ... acttacgcagATTTATGCCAAAGAGCAAAAGGACGTTCCAGACTGGATGAAGGCTCACCAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGCCCGCACTGCACCGATCGCAGGAGTGCTATTCTGTGCTCTAGCTGCAACAGCGTCGCGATGGATCCTCAACACCAAGCAGTACGTACTCCTCAACGTGgtgattctttttcttgctcgaactcatcgctttctgcccattcacagacagcaggacatgtagagtttttttccaactaggaaagggtgacaaagtgcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC