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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTTTAGGGAGAGAGGAAGGCCAAGAGTAAGCCTCAGGTGGCCGCAAGGGTTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatacttgcgacctttgcgctataattttcgcattgctattggggccgtagcttcagaagcgtttgtgggacggatgtgtgtttcgtgttccatg...

Basic information

species Physcomitrella patens
transcript PP1S39_223V6.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|100365340|gb|BY966930.1|BY966930
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18372655|gb|BJ204257.1|BJ204257
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|162257925|gb|FC433811.1|FC433811
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18349585|gb|BJ181635.1|BJ181635
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100421260|gb|BY976138.1|BY976138
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18345972|gb|BJ178015.1|BJ178015
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18360776|gb|BJ192839.1|BJ192839
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18370390|gb|BJ201992.1|BJ201992
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18348169|gb|BJ180216.1|BJ180216
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18372194|gb|BJ203796.1|BJ203796
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18368163|gb|BJ200248.1|BJ200248
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18354100|gb|BJ186155.1|BJ186155
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|67709466|gb|BJ965282.1|BJ965282
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18371488|gb|BJ203090.1|BJ203090
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100397788|gb|BY990401.1|BY990401
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100394441|gb|BY972070.1|BY972070
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18350717|gb|BJ182768.1|BJ182768
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18358095|gb|BJ190154.1|BJ190154
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18342265|gb|BJ174300.1|BJ174300
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100452436|gb|CJ975270.1|CJ975270
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18351625|gb|BJ183677.1|BJ183677
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18344672|gb|BJ176713.1|BJ176713
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|208376353|gb|DC932263.1|DC932263
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18375261|gb|BJ206839.1|BJ206839
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18357193|gb|BJ189252.1|BJ189252
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|208353588|gb|DC938739.1|DC938739
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18354951|gb|BJ187010.1|BJ187010
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|67573676|gb|BJ946500.1|BJ946500
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18326778|gb|BJ158778.1|BJ158778
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18355987|gb|BJ188046.1|BJ188046
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18344666|gb|BJ176707.1|BJ176707
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18342020|gb|BJ174055.1|BJ174055
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18348570|gb|BJ180619.1|BJ180619
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18349767|gb|BJ181817.1|BJ181817
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18356241|gb|BJ188300.1|BJ188300
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18361576|gb|BJ193642.1|BJ193642
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|67716811|gb|BJ967070.1|BJ967070
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18359800|gb|BJ191861.1|BJ191861
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGNCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18345776|gb|BJ177819.1|BJ177819
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18358179|gb|BJ190238.1|BJ190238
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|162164268|gb|FC342083.1|FC342083
EST:     GAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: GAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18364436|gb|BJ196509.1|BJ196509
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100422170|gb|BY957891.1|BY957891
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|208345672|gb|DC909603.1|DC909603
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18355091|gb|BJ187150.1|BJ187150
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18347822|gb|BJ179869.1|BJ179869
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18360414|gb|BJ192476.1|BJ192476
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|67573947|gb|BJ946771.1|BJ946771
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18350501|gb|BJ182552.1|BJ182552
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100450833|gb|CJ974462.1|CJ974462
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100405050|gb|BY991414.1|BY991414
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18353025|gb|BJ185080.1|BJ185080
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|162196847|gb|FC373902.1|FC373902
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18345119|gb|BJ177160.1|BJ177160
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100358199|gb|BY965522.1|BY965522
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18361832|gb|BJ193899.1|BJ193899
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100388041|gb|BY988514.1|BY988514
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18374909|gb|BJ206487.1|BJ206487
EST:     TTGGGTTGGAGGACTTGCAGCAGTANCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18365265|gb|BJ197339.1|BJ197339
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18349818|gb|BJ181869.1|BJ181869
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18347200|gb|BJ179246.1|BJ179246
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18343604|gb|BJ175642.1|BJ175642
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18357667|gb|BJ189726.1|BJ189726
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18342131|gb|BJ174166.1|BJ174166
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18348348|gb|BJ180396.1|BJ180396
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|162155719|gb|FC331332.1|FC331332
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18345346|gb|BJ177389.1|BJ177389
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18342604|gb|BJ174639.1|BJ174639
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100420772|gb|BY993498.1|BY993498
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18355375|gb|BJ187434.1|BJ187434
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18352377|gb|BJ184431.1|BJ184431
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18365105|gb|BJ197179.1|BJ197179
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|208372129|gb|DC940311.1|DC940311
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18347074|gb|BJ179120.1|BJ179120
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100440698|gb|BY980518.1|BY980518
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18332201|gb|BJ164214.1|BJ164214
EST:     TTGGTTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18344387|gb|BJ176427.1|BJ176427
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18350418|gb|BJ182469.1|BJ182469
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18352372|gb|BJ184426.1|BJ184426
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18365090|gb|BJ197164.1|BJ197164
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18363654|gb|BJ195726.1|BJ195726
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18348549|gb|BJ180598.1|BJ180598
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18345098|gb|BJ177139.1|BJ177139
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18349947|gb|BJ181998.1|BJ181998
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18375233|gb|BJ206811.1|BJ206811
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18370414|gb|BJ202016.1|BJ202016
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|208360512|gb|DC930267.1|DC930267
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18348707|gb|BJ180756.1|BJ180756
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18351337|gb|BJ183389.1|BJ183389
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18353705|gb|BJ185760.1|BJ185760
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18351145|gb|BJ183196.1|BJ183196
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18359030|gb|BJ191090.1|BJ191090
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18343820|gb|BJ175858.1|BJ175858
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|100390346|gb|BY952754.1|BY952754
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18351672|gb|BJ183724.1|BJ183724
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
EST: gi|18325413|gb|BJ157409.1|BJ157409
EST:     TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAG                         ATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC
genomic: TTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 33 (upstream exon), 35 (downstream exon)
Score: 14

GTTTTAGGGAGAGAGGAAGGCCAAGAGTAAGCCTCAGGTGGCCGCAAGGGTTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatac ... ctgcgtgcagATTCAGTATTGACATTCATTGCAGTGGATCTTGAGGTGTTGTCGTATCCGCAAGGGTGGAATCTACAATGGAGCGATTTCTGGCGGTGGGGCTTCTAGCA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTTTTAGGGAGAGAGGAAGGCCAAGAGTAAGCCTCAGGTGGCCGCAAGGGTTGGGTTGGAGGACTTGCAGCAGTAGCACGAGGCATCCTGGGTCTCTGAGgttcgtatacttgcgacctttgcgctataattttcgcattgctattggggccgtagcttcagaagcgtttgtgggacggatgtgtgtttcgtgttccatg

- - - - - - - - - - - - - - - - - - - - - - - - - - -  TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA