Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|208387114|gb|DC941286.1|DC941286EST: CAACTGATATAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAG GGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
genomic: CAACTGATATAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAGgtatgctttt ... gttgtcacagGGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
EST:
gi|208365774|gb|DC951037.1|DC951037EST: CAACTGATATAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAG GGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
genomic: CAACTGATATAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAGgtatgctttt ... gttgtcacagGGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
EST:
gi|37834734|gb|BJ592746.1|BJ592746EST: TAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAG GGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
genomic: TAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAGgtatgctttt ... gttgtcacagGGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
EST:
gi|208363497|gb|DC939730.1|DC939730EST: CAACTGATATAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAG GGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
genomic: CAACTGATATAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAGgtatgctttt ... gttgtcacagGGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
EST:
gi|208386139|gb|DC949050.1|DC949050EST: TAAAGGAGTGGCTGTGATTGAGAAAGCAG GGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
genomic: TAAAGGAGTGGCTGTGATTGAGAAAGCAGgtatgctttt ... gttgtcacagGGAAGCGTATCATGGCATTACCATATCCAGGAACAGTTGATAGGATGATAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATTGTAGGTCCTCCGACGTATCTTGACAATTCGCTGTACTTAAAAATGTACAACTGATATAGTCATCGCCATAAAGGAGTGGCTGTGATTGAGAAAGCAGgtatgcttttgagttatgtattagagaaagcgtatggggtgaagttctccgtggcttctttattgtttgcgaggatctttattaattttgaaaagctcac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG