1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CAGCATTCTCTTTCTCTTCTTCGCACTTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttcccccctccctttcactctgcgttcgattctgcaaccatttctctatctgcgtctttggaactaccctgtaacgatctgcggctccagtcgtg...
species | Physcomitrella patens |
transcript | PP1S364_56V6.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATG CCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGGEST: gi|37830055|gb|BJ588067.1|BJ588067
genomic: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttccc ... gtgaacgtagCCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
EST: TCCTTCCGCAATG CCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGGEST: gi|18331333|gb|BJ163343.1|BJ163343
genomic: TCCTTCCGCAATGgtacgttccc ... gtgaacgtagCCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
EST: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATG CCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGGEST: gi|18364318|gb|BJ196391.1|BJ196391
genomic: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttccc ... gtgaacgtagCCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
EST: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATG CCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGGEST: gi|67702989|gb|BJ963222.1|BJ963222
genomic: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttccc ... gtgaacgtagCCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
EST: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATG CCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGGEST: gi|37851335|gb|BJ609343.1|BJ609343
genomic: TTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttccc ... gtgaacgtagCCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
EST: CTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATG CCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGGEST: gi|37841405|gb|BJ599413.1|BJ599413
genomic: CTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttccc ... gtgaacgtagCCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
EST: CTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATG CCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
genomic: CTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttccc ... gtgaacgtagCCTGCAAGGCCAGAGGGTCGGATTTGCGAGTGCACTTCAAGAATACTAGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGCATTCTCTTTCTCTTCTTCGCACTTCCTCTCGCTCAGCTTGGGCGCTGTGTTCTGCACCCTCCTTCCGCAATGgtacgttcccccctccctttcactctgcgttcgattctgcaaccatttctctatctgcgtctttggaactaccctgtaacgatctgcggctccagtcgtg
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