1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CACGCCTCTCAATCGCAGGCAGGCTCTTACTCGGTCGGTCGCCTTCTTCGGTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaacccatcatcgctcttttctgcaaatctgataatactaccctgcttggttcacttgctcactgctggttctcccttccctttttctatgagcag
species | Physcomitrella patens |
transcript | PP1S29_222V6.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67709528|gb|BJ965344.1|BJ965344
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGGTGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67717578|gb|BJ967837.1|BJ967837
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162276013|gb|FC452289.1|FC452289
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162238647|gb|FC418191.1|FC418191
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18342128|gb|BJ174163.1|BJ174163
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67726093|gb|BJ976352.1|BJ976352
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: TACAATGGCCACCCAAATGAGCCAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18356425|gb|BJ188484.1|BJ188484
genomic: TACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18326428|gb|BJ158427.1|BJ158427
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACEST: gi|18343666|gb|BJ175704.1|BJ175704
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAAC
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162254376|gb|FC430511.1|FC430511
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: CCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18361069|gb|BJ193133.1|BJ193133
genomic: CCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162226892|gb|FC403080.1|FC403080
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18325130|gb|BJ157126.1|BJ157126
genomic: GGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: AATTCNACGCTACAATGGCCACCCAAATGAGCANGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162259569|gb|FC435496.1|FC435496
genomic: AATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: AAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|208363095|gb|DC958008.1|DC958008
genomic: AAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67726844|gb|BJ977103.1|BJ977103
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18330673|gb|BJ162679.1|BJ162679
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|208362665|gb|DC939533.1|DC939533
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162251398|gb|FC427689.1|FC427689
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: ACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18352298|gb|BJ184352.1|BJ184352
genomic: ACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18342319|gb|BJ174354.1|BJ174354
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18367767|gb|BJ199850.1|BJ199850
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18350622|gb|BJ182673.1|BJ182673
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|19790485|gb|BQ041896.1|BQ041896
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18372240|gb|BJ203842.1|BJ203842
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162222971|gb|FC399927.1|FC399927
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162259363|gb|FC436228.1|FC436228
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162217178|gb|FC392542.1|FC392542
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162247018|gb|FC422192.1|FC422192
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: ACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162259902|gb|FC436037.1|FC436037
genomic: ACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67719996|gb|BJ970255.1|BJ970255
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: NTCGCCAATTCGACGCTACAATGGCCACCCAAATGAACAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18351686|gb|BJ183738.1|BJ183738
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67718049|gb|BJ968308.1|BJ968308
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67726548|gb|BJ976807.1|BJ976807
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162274783|gb|FC450524.1|FC450524
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18329334|gb|BJ161340.1|BJ161340
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|100361910|gb|BY947688.1|BY947688
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67724505|gb|BJ974764.1|BJ974764
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: AAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAG-NNNNNNNGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|37833361|gb|BJ591373.1|BJ591373
genomic: AAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGNNNNNNNNGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18362632|gb|BJ194703.1|BJ194703
genomic: GAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162227667|gb|FC402335.1|FC402335
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162272710|gb|FC448336.1|FC448336
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67718357|gb|BJ968616.1|BJ968616
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67703704|gb|BJ963937.1|BJ963937
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67719120|gb|BJ969379.1|BJ969379
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162247019|gb|FC422193.1|FC422193
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|18332424|gb|BJ164437.1|BJ164437
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67704567|gb|BJ964800.1|BJ964800
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67727433|gb|BJ977692.1|BJ977692
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: CCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|19788536|gb|BQ040786.1|BQ040786
genomic: CCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|162206865|gb|FC382727.1|FC382727
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67712794|gb|BJ966243.1|BJ966243
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGGEST: gi|67702186|gb|BJ962419.1|BJ962419
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
EST: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAG TTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
genomic: GTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaa ... ctatgagcagTTCGTAGCGGATGGAGTTTTCTTTGCGGAGCTGAACGAGCTCCTCACCCGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACGCCTCTCAATCGCAGGCAGGCTCTTACTCGGTCGGTCGCCTTCTTCGGTCGCCAATTCGACGCTACAATGGCCACCCAAATGAGCAAGAAGCGAAAGgtgtgtgtaacccatcatcgctcttttctgcaaatctgataatactaccctgcttggttcacttgctcactgctggttctcccttccctttttctatgagcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC