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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCGAAGTCCTCTTTCGTCGTCCTCGCAGCGTCGTCGCTTCCCTCGGAGCTCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggatctcaattgctctctgttcccccccttttgctggtcttgttccaatttcacttgcggtattgttgttgttgtcttagccgcctttttttgt...

Basic information

species Physcomitrella patens
transcript PP1S279_27V6.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67725783|gb|BJ976042.1|BJ976042
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162212327|gb|FC388437.1|FC388437
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|208394747|gb|DC924078.1|DC924078
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162249275|gb|FC424803.1|FC424803
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTTTTGGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|7287057|gb|AW599544.1|AW599544
EST:     CGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: CGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162214675|gb|FC390706.1|FC390706
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67716831|gb|BJ967090.1|BJ967090
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162234749|gb|FC410587.1|FC410587
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTTTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162227103|gb|FC402278.1|FC402278
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162222350|gb|FC397136.1|FC397136
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67573986|gb|BJ946810.1|BJ946810
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|37835404|gb|BJ593416.1|BJ593416
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162209102|gb|FC385126.1|FC385126
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162223045|gb|FC399962.1|FC399962
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|19783021|gb|BQ039954.1|BQ039954
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162193771|gb|FC369205.1|FC369205
EST:     CCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: CCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|18353933|gb|BJ185988.1|BJ185988
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|19785606|gb|BQ040344.1|BQ040344
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162221218|gb|FC398457.1|FC398457
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162253946|gb|FC430203.1|FC430203
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162209103|gb|FC385127.1|FC385127
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|208350004|gb|DC910239.1|DC910239
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67718190|gb|BJ968449.1|BJ968449
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCACACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|37851820|gb|BJ609828.1|BJ609828
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTGTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162249276|gb|FC424804.1|FC424804
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162193772|gb|FC369206.1|FC369206
EST:     CCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: CCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67696288|gb|BJ956521.1|BJ956521
EST:     TGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162234750|gb|FC410588.1|FC410588
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|18345939|gb|BJ177982.1|BJ177982
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162221149|gb|FC397790.1|FC397790
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162233248|gb|FC409590.1|FC409590
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67572907|gb|BJ945731.1|BJ945731
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67725349|gb|BJ975608.1|BJ975608
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162202318|gb|FC379157.1|FC379157
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|37824688|gb|BJ582754.1|BJ582754
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|208350626|gb|DC906228.1|DC906228
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162239552|gb|FC414065.1|FC414065
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67726677|gb|BJ976936.1|BJ976936
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCACACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|18345573|gb|BJ177616.1|BJ177616
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67697375|gb|BJ957608.1|BJ957608
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|37825052|gb|BJ583118.1|BJ583118
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|15261477|gb|BI436787.1|BI436787
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67578806|gb|BJ950973.1|BJ950973
EST:     TCCCCCCTTGCGCNTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|67717267|gb|BJ967526.1|BJ967526
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
EST: gi|162253945|gb|FC430202.1|FC430202
EST:     TCCCCCCTTGCGCTTGACGTCTGCCCTCTTTTGGTCGTCCTGCCGCCATG                         GATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG
genomic: TCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 127

CTCGAAGTCCTCTTTCGTCGTCCTCGCAGCGTCGTCGCTTCCCTCGGAGCTCCCCCCTTGCGCTTGACGTCTGCCCTCTCTTCGTCGTCCTGCCGCCATGgtatgtggat ... atctgtgcagGATTCCGCCGTGAAGCTTGCTATTGTCATGAAGGTGATTGGCCGCACCGGGTCCCGAGGTCAGGTGACCCAAGTGCGTGTGAAGTTTCTGGATGATCAAA




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