1 5' 3' | 2 5' 3' | 3 5' 3' |
TGGGACTATGAAGTGTCCTATTCCGAGGACCATGCCCAGCAATGCTAAGGCTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctatctcatctcctggtctcgcattcgtatgtgtagtgcgcagttctgttccaaccgtgatatgtatgaacttcaatgatcaaatgatgcttag...
species | Physcomitrella patens |
transcript | PP1S147_136V6.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACG GTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAGEST: gi|162256141|gb|FC432426.1|FC432426
genomic: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctat ... gtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
EST: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACG GTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAGEST: gi|162179116|gb|FC355581.1|FC355581
genomic: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctat ... gtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
EST: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACG GTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
genomic: CTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctat ... gtctggtcagGTTGATGACAAGGACCAAACTGGATCGATGAATAAGAAGTCGATGCAAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGACTATGAAGTGTCCTATTCCGAGGACCATGCCCAGCAATGCTAAGGCTTGCCCAGCTGTGCAGAATGCTAATTCCGTAAACAAGCGCCCTCTTACGgtaaggctatctcatctcctggtctcgcattcgtatgtgtagtgcgcagttctgttccaaccgtgatatgtatgaacttcaatgatcaaatgatgcttag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG