Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGCCCCGCAATCAACATGGGTGCGTCGTTCGACTTCTCCGGCTCTGATGGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactccgtcgccattctagttgaatcctttgttgtatctttcttactcttacttctctttttgtgttttgtatgggtgctgtctggtcgctttgtaagggtttagggggtctgaagaagattcttattttttgtttgatttgtgtgaacgctcag

Basic information

species Physcomitrella patens
transcript PP1S145_172V6.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162238847|gb|FC415063.1|FC415063
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162239462|gb|FC417953.1|FC417953
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67577987|gb|BJ950154.1|BJ950154
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67709759|gb|BJ965575.1|BJ965575
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|7287411|gb|AW599898.1|AW599898
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208363607|gb|DC939784.1|DC939784
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162269965|gb|FC445950.1|FC445950
EST:     AGAAGCTTGATGAGTACCTCGCCACCCGCAGTT-CATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: AGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162228490|gb|FC404439.1|FC404439
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67703898|gb|BJ964131.1|BJ964131
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67575615|gb|BJ948439.1|BJ948439
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|100396170|gb|BY972269.1|BY972269
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208391404|gb|DC941826.1|DC941826
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67569073|gb|BJ941897.1|BJ941897
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|18342666|gb|BJ174701.1|BJ174701
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67704326|gb|BJ964559.1|BJ964559
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|19782076|gb|BQ039805.1|BQ039805
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67702466|gb|BJ962699.1|BJ962699
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCNGTCTACGTTGNCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67719795|gb|BJ970054.1|BJ970054
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67718847|gb|BJ969106.1|BJ969106
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTCGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67508425|gb|BJ941292.1|BJ941292
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67716572|gb|BJ966832.1|BJ966832
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67704386|gb|BJ964619.1|BJ964619
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTCACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67508195|gb|BJ941066.1|BJ941066
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208387918|gb|DC929262.1|DC929262
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67725090|gb|BJ975349.1|BJ975349
EST:     GGCNTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67571206|gb|BJ944030.1|BJ944030
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67702752|gb|BJ962985.1|BJ962985
EST:     TTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: TTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|18352435|gb|BJ184489.1|BJ184489
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67507571|gb|BJ940452.1|BJ940452
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162250094|gb|FC427403.1|FC427403
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67508284|gb|BJ941153.1|BJ941153
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67727051|gb|BJ977310.1|BJ977310
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67704344|gb|BJ964577.1|BJ964577
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67570873|gb|BJ943697.1|BJ943697
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208391324|gb|DC942124.1|DC942124
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208375357|gb|DC940467.1|DC940467
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67508566|gb|BJ941429.1|BJ941429
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162271425|gb|FC446998.1|FC446998
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67717107|gb|BJ967366.1|BJ967366
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|7067131|gb|AW496986.1|AW496986
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208392005|gb|DC941853.1|DC941853
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67701825|gb|BJ962058.1|BJ962058
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162214899|gb|FC390459.1|FC390459
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162264817|gb|FC440384.1|FC440384
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|18325996|gb|BJ157995.1|BJ157995
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67703377|gb|BJ963610.1|BJ963610
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67727897|gb|BJ978156.1|BJ978156
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208385020|gb|DC911322.1|DC911322
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208379522|gb|DC911133.1|DC911133
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162242217|gb|FC414504.1|FC414504
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162201725|gb|FC378010.1|FC378010
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67726080|gb|BJ976339.1|BJ976339
EST:     AGAAGC-TGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTAGAGAGCGT
genomic: AGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67702447|gb|BJ962680.1|BJ962680
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67571473|gb|BJ944297.1|BJ944297
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|100422655|gb|BY976482.1|BY976482
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67704022|gb|BJ964255.1|BJ964255
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162203877|gb|FC379974.1|FC379974
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162211572|gb|FC387652.1|FC387652
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|7047095|gb|AW476996.1|AW476996
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCCG
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGC-G
EST: gi|208368791|gb|DC943791.1|DC943791
EST:     GGC-TGAAGAAGC-TGATGAGTACCTCGCCACCCGCAGTTACATCTCT-G                         GTACCAAGCTTCTCGGGATGACCTTGCCGTTTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162246444|gb|FC419954.1|FC419954
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162246443|gb|FC419953.1|FC419953
EST:     GGC-TGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67572743|gb|BJ945567.1|BJ945567
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67718332|gb|BJ968591.1|BJ968591
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67727204|gb|BJ977463.1|BJ977463
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTCGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162229274|gb|FC405361.1|FC405361
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|100442383|gb|BY981407.1|BY981407
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162260084|gb|FC435803.1|FC435803
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162198734|gb|FC374217.1|FC374217
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67578023|gb|BJ950190.1|BJ950190
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67719631|gb|BJ969890.1|BJ969890
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67726823|gb|BJ977082.1|BJ977082
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162213214|gb|FC389294.1|FC389294
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162159086|gb|FC334881.1|FC334881
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|18344340|gb|BJ176380.1|BJ176380
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67702042|gb|BJ962275.1|BJ962275
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162198735|gb|FC374218.1|FC374218
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|22132596|gb|BQ827245.1|BQ827245
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67717565|gb|BJ967824.1|BJ967824
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTAGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|18342737|gb|BJ174772.1|BJ174772
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162279441|gb|FC455557.1|FC455557
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67727543|gb|BJ977802.1|BJ977802
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67576107|gb|BJ948931.1|BJ948931
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|208389854|gb|DC937685.1|DC937685
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|18343303|gb|BJ175341.1|BJ175341
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|100404022|gb|BY955216.1|BY955216
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|18374442|gb|BJ206020.1|BJ206020
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|162218815|gb|FC394358.1|FC394358
EST:     GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: GGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
EST: gi|67699091|gb|BJ959324.1|BJ959324
EST:     TGAAGAAGCNTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGG                         GTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT
genomic: TGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 34 (downstream exon)
Score: 46

GGAGCCCCGCAATCAACATGGGTGCGTCGTTCGACTTCTCCGGCTCTGATGGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactc ... gaacgctcagGTACCAAGCTTCTCGGGATGACCTTGCCGTCTACGTTGCCTTGGAGAGCGTGCCCGCGGAGTATGTGAATGCCTCCAGATGGTACAAGCACATCTCAGCG




<











<


<









Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGAGCCCCGCAATCAACATGGGTGCGTCGTTCGACTTCTCCGGCTCTGATGGCTTGAAGAAGCTTGATGAGTACCTCGCCACCCGCAGTTACATCTCTGGgtgagtactccgtcgccattctagttgaatcctttgttgtatctttcttactcttacttctctttttgtgttttgtatgggtgctgtctggtcgctttgtaagggtttagggggtctgaagaagattcttattttttgtttgatttgtgtgaacgctcag

- - - - - - - - - - - - - - - - - - - - - - - - - -  TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC