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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgacaccctttctcttttctgtacagcttcggatttctcttctctgatcttccttgttgatccttgtcgttcatattttgttgcctccttgcctt...

Basic information

species Physcomitrella patens
transcript PP1S130_298V6.1
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S130_298V6.1 (Physcomitrella patens), 5'ss of exon 1
lower sequence: LOC_Os01g41610.2 (Oryza sativa), 5'ss of exon 1
AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgacaccctttctcttttctgtacagcttcggatttctcttctctgatcttccttgttgatccttgtcgt-tcatattttgttgcctccttgcctt
|| |||| |||||  |||||||||| || || || || ||| |||| || |||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||   |  |    ||   |    |||| |   |||      |||   |  |    |  ||  |  |    |  || |     | ||||| |   ||||   
AGGAGGTGATGGAGAAGAACAAGCAGCACGTGGTGCAGCCACCCACCGTGGAGAAGTGCCAGGAGCTCTCCAAGCAGCTCTTCTACACCCGCCTCGCCAGgtgatccccggatttcacccccgctgtgcctgttcatgcggctccatttggtcgctgtttcgtagttggcggtgtgttgcgatctgttggcaa-ttgcgcg

upper sequence: PP1S130_298V6.1 (Physcomitrella patens), 5'ss of exon 1
lower sequence: LOC_Os05g45740.2 (Oryza sativa), 5'ss of exon 1
AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgacaccctttctcttttctgtacagcttc----ggatttctcttctctgatcttccttgttgatccttgtcgttcatattttgttgcctccttgcctt
 |  | |||||||  ||||| || |  | |||| | | ||  ||||  |||||| ||| ||||||||||| ||||| ||||||||||| |||||||| ||||| |   ||||||  |  | | |  | || ||||     ||| |||     ||   | ||    || |||  | | ||| | |||  |    |   | |    
GGGCGCTCATGGAGAAGAACCAGAAGTACGTCGCCGACCCGCCCACCATCGAGAGGTGCCAGGAGCTCTCCAAGCAGCTCTTCTACACCCGCCTCGCCAGgtcggtc-caccctcacgatctccc-tccaccttctccacgatctcttagtcctccacatctgaatt-atctctattgtttagattgcgcactccattagaac-

upper sequence: PP1S130_298V6.1 (Physcomitrella patens), 5'ss of exon 1
lower sequence: LOC_Os01g52200.1 (Oryza sativa), 5'ss of exon 1
AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgacaccctttctcttttctgtacagcttcggatttctcttctctgatcttccttg---ttgatccttgtcgttcatattttgttgcctccttgcctt----
|| || |||||||   ||||||||   | ||| || | ||  ||||  || ||| ||| ||||||||||| ||||| ||||||||||| |||||||| |||||       ||||  ||  |  || || ||     |||   ||  |  |||| ||  |||   ||| |        |  || |||| || | |    ||       
AGGAGCTCATGGAGCGGAACAAGCGCTACGTCATCGACCCGCCCACCATCCAGACGTGCCAGGAGCTCTCCAAGCAGCTCTTCTACACCCGCCTCGCCAGgtc-------ccctccctaatccctatagagtgatagatcgatcagcattgattttgattgattttggttagctcgatcgatcttttttttcttttgcgctccattg

upper sequence: PP1S130_298V6.1 (Physcomitrella patens), 5'ss of exon 1
lower sequence: GRMZM2G042078_T01 (Zea mays), 5'ss of exon 1
AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgacaccctttctcttttctg-tacagcttcggatttctcttctctgatcttcct-tgttgatccttgtcgttcatattttgttgcctccttgcctt---
|| |||| |||||  ||||||||||  | ||||| || ||  |||| ||||||||||| ||||||||||| ||||| ||||| ||||| |||||||| ||||    || ||| |||  || || || |   || ||   || |  ||  |  ||     | | |||      |   |  |   | ||||   | |  ||  |   
AGGAGGTAATGGAGAAGAACAAGCAGTACGTCGTTCAGCCCCCCACCGTCGAGAAGTGCCAGGAGCTCTCCAAGCAGCTCTTTTACACCCGCCTCGCAAGgt----gaaaccgtttgcctcttttgctgttgcgtctcgttgcgattagccaattgggttctattgcctgaagcgctgtacgatctgtt-tgtgcgcgcagtaat

upper sequence: PP1S130_298V6.1 (Physcomitrella patens), 5'ss of exon 1
lower sequence: AC194341.4_FGT002 (Zea mays), 5'ss of exon 1
AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctg--cgacaccctttctcttttctgtacagcttcggatttctcttctctgatcttccttgttgatccttgtcgttcatattttgttgcctccttgcctt---
|| || |||||||  ||||||||||  | ||||| || ||  ||||  ||||||| || ||||||||||| ||||| ||||||||||| |||||||| ||||     | ||      | |  ||  |||    | | |   ||      |  | |  || |   |||     ||  | ||   | |||| | | | ||| ||   
AGGAGCTCATGGAGAAGAACAAGCAGTACGTCGTGCAGCCCCCCACCATCGAGAAATGCCAGGAGCTCTCCAAGCAGCTCTTCTACACCCGCCTCGCAAGgtgaaaccaactgtggcttttgttgttgtgtctcgttgcgattagtcaattgggttctcttgcctgaa----gtgctgcacgatctgtt-cgttcgtgcgtttaa

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18366827|gb|BJ198907.1|BJ198907
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162204333|gb|FC380521.1|FC380521
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|19781964|gb|BQ039792.1|BQ039792
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|15730037|gb|BI741629.1|BI741629
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162204559|gb|FC381956.1|FC381956
EST:     GAGAAGTGTCAGGAGCTCTTTAAGCAACTTTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|67507533|gb|BJ940415.1|BJ940415
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162268331|gb|FC444620.1|FC444620
EST:     AGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: AGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|67719659|gb|BJ969918.1|BJ969918
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|15730256|gb|BI741757.1|BI741757
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|18373558|gb|BJ205136.1|BJ205136
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|22492062|gb|BU051985.1|BU051985
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162246365|gb|FC419927.1|FC419927
EST:     GAGAAGTGTCAGGAGCTCTTTAAGCAACTTTTTTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|37847221|gb|BJ605229.1|BJ605229
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|67575811|gb|BJ948635.1|BJ948635
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|19779887|gb|BQ039486.1|BQ039486
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162266336|gb|FC443191.1|FC443191
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|22131622|gb|BQ826709.1|BQ826709
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|37838744|gb|BJ596752.1|BJ596752
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|19789104|gb|BQ041096.1|BQ041096
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162231584|gb|FC408216.1|FC408216
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162266337|gb|FC443192.1|FC443192
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|37844057|gb|BJ602065.1|BJ602065
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|15327472|gb|BI488226.1|BI488226
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162204560|gb|FC381957.1|FC381957
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|162246366|gb|FC419928.1|FC419928
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|67727923|gb|BJ978182.1|BJ978182
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|15730276|gb|BI741775.1|BI741775
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
EST: gi|15261756|gb|BI437066.1|BI437066
EST:     GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAG                         TTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA
genomic: GAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 29 (downstream exon)
Score: 16

AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgaca ... gttgatgaagTTTACCTGGGAGGTACGAGGCTTTTTGGAAGGAGGTGGACTTCGTCAAGCAGAAATTAGTGCAAAGGAATGACTTGAAGCTGGAAGAAGTTGGCATTGCG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGCAGGTCATGGAAGAGAACAAGCAACATGTCGTCCATCCAGCCACAGTCGAGAAGTGTCAGGAGCTCTCTAAGCAACTCTTCTACACTCGCCTCGCTAGgtctgcgacaccctttctcttttctgtacagcttcggatttctcttctctgatcttccttgttgatccttgtcgttcatattttgttgcctccttgcctt

- - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCAA