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CTATTGGAGACATCAAGAAGAGGGTATCTTGCTGCACTGTCAGCATCGAGTTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAGgtagtgcttactccgcagttctaactctccacgcctgcacttgaaccgctatcttatacactcctagataaatcaagccgttactgcctttcatatcttt...
species | Oryza sativa |
transcript | LOC_Os08g23810.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAG GTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTCCTGEST: gi|29613728|gb|CB618741.1|CB618741
genomic: TTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAGgtagtgctta ... atatttccagGTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTCCTG
EST: TTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAG GTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTCEST: gi|29613729|gb|CB618742.1|CB618742
genomic: TTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAGgtagtgctta ... atatttccagGTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTC
EST: TTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAG GTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTCCTG
genomic: TTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAGgtagtgctta ... atatttccagGTGGTGCTTCCATCTCTCTAACATACATTGCATCTGAAAGGGCAATTCCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATTGGAGACATCAAGAAGAGGGTATCTTGCTGCACTGTCAGCATCGAGTTACTCCTTCGTCTCTTTGCTTCAGCACTTCCTTCCTATAATGAATCCAGgtagtgcttactccgcagttctaactctccacgcctgcacttgaaccgctatcttatacactcctagataaatcaagccgttactgcctttcatatcttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccacgcc