Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatctgttgaatgttctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttcttgtcgtgcag

Basic information

species Oryza sativa
transcript LOC_Os07g47580.1
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 8
lower sequence: GRMZM2G009876_T01 (Zea mays), 5'ss of exon 8
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatctgttgaatgttctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttcttgtcgtgcag
|| || || ||||| |||||||||||||| || ||||||||||||||||||||| ||  |||||   | | ||||| |  | ||  |    |||  || ||| || | ||||| || ||      |||||||  |||||
GTAAATGTCAGTGAGCTTGGTCTGGTAACTCCCGCTGGAAAAGTTGTTTGGGgtgagaaatctgccaactcttctg-tgctctttttacccaac--ctaccttgaccctgttcaattaacagaatttcttgtgttgcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 8
lower sequence: GRMZM2G174204_T01 (Zea mays), 5'ss of exon 8
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatctgttgaatgttctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttcttgtcgtgcag
|| || || ||||| |||||||||||||| || ||||||||||||||||||||| ||  || ||   |   |||| ||  | |||||    ||| |  || ||   | | ||| ||||| ||   | |||||  |||||
GTAAATGTCAGTGAGCTTGGTCTGGTAACTCCCGCTGGAAAAGTTGTTTGGGgtgagaaatttgcc-agctttcttctcttcttgct---caaccta-ccttgagtccttttcaataaaccaaattgcttgtgttgcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 8
lower sequence: GLYMA10G00490.1 (Glycine max), 5'ss of exon 8
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggc-atctgttga--atgttctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttc-ttgtcg-tgcag
||||| || |||||||||||||| || || |||||||| |||||||| |||||||||   || | ||     |||| ||||||   |     | || || |  ||| || |  |    |  ||    |||    || | |||||
GTGAATGTCAGTGAACTTGGTCTTGTCACACCTGCTGGGAAAGTTGTGTGGGgtaagattattttttccttgtgttttgcttaccat-tgactgaaattttaactgaaattgatgtgttggaattttgtttgccgtggatgcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 8
lower sequence: GLYMA02G35500.1 (Glycine max), 5'ss of exon 8
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggc-atctgttga--atgttctgcttattttgctt--tttaacttctccctggaacttgttccataaaacagcgtt--cttgtcgtgcag
||||| || |||||||||||||| || || || ||||| |||||||| |||||||||   || ||||     |||| ||||| ||    ||   | || |  |  ||| || |  |    |  ||    |||  |  |   |||||
GTGAATGTCAGTGAACTTGGTCTTGTCACGCCGGCTGGGAAAGTTGTGTGGGgtaagattatttgttccttgtgttttgcttgttaccattgactcaaatcttaactgaaattgatgtgttggaattttgtttgccgggaatgcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 8
lower sequence: GLYMA10G10000.1 (Glycine max), 5'ss of exon 8
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggc-atctgttgaatgt--tctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttcttgtcgtgcag----
||||| || |||||||||||||| || || |||||||| |||||||| |||||||||   || ||||  ||||  | | ||||   |    |  || ||    ||| || |  |    |  ||    |||  || |||| |     
GTGAATGTCAGTGAACTTGGTCTTGTCACACCTGCTGGGAAAGTTGTGTGGGgtaagattatttgttccatgtgttttacttaccattgactgaaattt---tctgaaattgatgtgttggaattttgtt--tgccgtgaatgcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 8
lower sequence: EFJ37687 (Selaginella moellendorffii), 5'ss of exon 8
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatctgttgaatgttctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttcttgtcgtgcag
|| || ||||| || || || || ||||| ||||||||||||||||| |||||||||   | ||  ||      ||   |  ||  ||  ||||||  | |   | ||||   |  |                      
GTAAATGTTAGCGAGCTCGGACTCGTAACTCCTGCTGGAAAAGTTGTATGGGgtaagat-tttggcgatccgattgaaaacgtt--ttgctaactttactc---atcttgcctctcag---------------------

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 8
lower sequence: EFJ15002 (Selaginella moellendorffii), 5'ss of exon 8
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatctgttgaatgttctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttcttgtcgtgcag
|| || ||||| || || || || ||||| ||||||||||||||||| |||||||||   |  |    | | | ||   |  ||  ||  ||||||  | |   | ||||   |  |                      
GTAAATGTTAGCGAGCTCGGACTCGTAACTCCTGCTGGAAAAGTTGTATGGGgtaagattttggcgatacgat-tgaaaacgtt--ttgctaactttactc---atcttgcctctcag---------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58681488|gb|CK070175.1|CK070175
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|89193841|gb|CI018159.1|CI018159
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86542436|gb|CI182642.1|CI182642
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86824070|gb|CI260725.1|CI260725
EST:     GAACGTTAGTGAACTTGGTCTGGTAATCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87032604|gb|CI266244.1|CI266244
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|218485729|gb|FG965787.1|FG965787
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88902846|gb|CI088384.1|CI088384
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33658104|gb|CF280718.1|CF280718
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86512013|gb|CI154646.1|CI154646
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88276346|gb|CI396950.1|CI396950
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88480982|gb|CI418253.1|CI418253
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87013241|gb|CI265339.1|CI265339
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|218483038|gb|FG956503.1|FG956503
EST:     GAACGTGAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCCATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|58679899|gb|CK068586.1|CK068586
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|218489658|gb|FG968764.1|FG968764
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88203250|gb|CI203099.1|CI203099
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88213234|gb|CI213083.1|CI213083
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87032959|gb|CI187583.1|CI187583
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86595161|gb|CI260400.1|CI260400
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|55408961|gb|CV721337.1|CV721337
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88217375|gb|CI217224.1|CI217224
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86546894|gb|CI187100.1|CI187100
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88227941|gb|CI227421.1|CI227421
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88212016|gb|CI211656.1|CI211656
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33688903|gb|CF317142.1|CF317142
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGTCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|29624519|gb|CB629530.1|CB629530
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|22307478|gb|BQ908700.1|BQ908700
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86599846|gb|CI256008.1|CI256008
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88902925|gb|CI088463.1|CI088463
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|15848297|gb|BI796573.1|BI796573
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACCAACAACCCAGAGAATGAT-GCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88466867|gb|CI539663.1|CI539663
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|29662524|gb|CB658799.1|CB658799
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|89189113|gb|CI012263.1|CI012263
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87034678|gb|CI189302.1|CI189302
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86599387|gb|CI251345.1|CI251345
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88838317|gb|CI373677.1|CI373677
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88218554|gb|CI218403.1|CI218403
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|218494317|gb|FG959910.1|FG959910
EST:     AACGTTAGTGAACTTGGTCTGGTAACCCCCTGTTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCA-TG
genomic: AACGTTAGTGAACTTGGTCTGGTAACCCC-TGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88521029|gb|CI448683.1|CI448683
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88472033|gb|CI409304.1|CI409304
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86526615|gb|CI166821.1|CI166821
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACTTACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|89180335|gb|CI044614.1|CI044614
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88478659|gb|CI415930.1|CI415930
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88216072|gb|CI215921.1|CI215921
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88243732|gb|CI242854.1|CI242854
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87020361|gb|CI261225.1|CI261225
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|29668016|gb|CB664291.1|CB664291
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88282338|gb|CI403734.1|CI403734
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33657880|gb|CF280494.1|CF280494
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAAGAATGATGGCTGTATCAAT
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAG-AGAATGATGGCTGTATCAAT
EST: gi|88852632|gb|CI008825.1|CI008825
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86522597|gb|CI162803.1|CI162803
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86499796|gb|CI142429.1|CI142429
EST:     GA-CGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86508231|gb|CI150864.1|CI150864
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACATACTACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33658075|gb|CF280689.1|CF280689
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAAGAATGATGGCTGTATCAAT
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAG-AGAATGATGGCTGTATCAAT
EST: gi|87028389|gb|CI263731.1|CI263731
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88487047|gb|CI424318.1|CI424318
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86595303|gb|CI262541.1|CI262541
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|8527444|gb|AU092259.1|AU092259
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87022380|gb|CI267517.1|CI267517
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88906732|gb|CI375804.1|CI375804
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|218478162|gb|FG952607.1|FG952607
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|15846700|gb|BI794976.1|BI794976
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTAC-AAC-ACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88247740|gb|CI247589.1|CI247589
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88220513|gb|CI220073.1|CI220073
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33658151|gb|CF280765.1|CF280765
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTTCAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88907479|gb|CI090273.1|CI090273
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86524051|gb|CI164257.1|CI164257
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88241353|gb|CI241202.1|CI241202
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86412595|gb|CI067000.1|CI067000
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86595320|gb|CI262558.1|CI262558
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTCGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86528308|gb|CI168514.1|CI168514
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86593534|gb|CI264413.1|CI264413
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88216088|gb|CI215937.1|CI215937
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86531880|gb|CI172086.1|CI172086
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88510885|gb|CI438391.1|CI438391
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86430517|gb|CI082940.1|CI082940
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87032829|gb|CI187453.1|CI187453
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86508710|gb|CI151343.1|CI151343
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88273573|gb|CI393979.1|CI393979
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86896805|gb|CI317337.1|CI317337
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86492734|gb|CI135367.1|CI135367
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87022128|gb|CI259200.1|CI259200
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|87025269|gb|CI265834.1|CI265834
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33692112|gb|CF320351.1|CF320351
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86493139|gb|CI135772.1|CI135772
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88486150|gb|CI423421.1|CI423421
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86432117|gb|CI085728.1|CI085728
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86259659|gb|CI065532.1|CI065532
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86523492|gb|CI163698.1|CI163698
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33813022|gb|CF332401.1|CF332401
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88848411|gb|CI086933.1|CI086933
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|86826901|gb|CI268792.1|CI268792
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACTACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|218500603|gb|FG956643.1|FG956643
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88238402|gb|CI238251.1|CI238251
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|88207774|gb|CI207623.1|CI207623
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATG
EST: gi|33809373|gb|CF330566.1|CF330566
EST:     GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG                         GTAAATATGCACAAGTTACAAACAACCCCAGAGAATGATGGCTGTATCAAT
genomic: GAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCC-AGAGAATGATGGCTGTATCAAT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 49 (downstream exon)
Score: 22

GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatc ... tgtcgtgcagGTAAATATGCACAAGTTACAAACAACCCAGAGAATGATGGCTGTATCAATGCTGTCTTACTCGTGTAAGGACGCAATGCTATACACTTCATTCTTCTCGT




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGGgtaaggcatctgttgaatgttctgcttattttgctttttaacttctccctggaacttgttccataaaacagcgttcttgtcgtgcag

- - - - - - - - - - - - - - - -  GCTGGA