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ACCCAACTCATTGTAATACACTGGCCTATAGCAGTTCAAAGGGTTCTATCCGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaattcatcttatgccttttacctgcaacattttatccgtgtgtactggaggtagtcgtggacttcttttgacggttgggacttggggctgcataagattctctattctatactagtaatagaatgtcacaatatcagcatgagataacaagaacctttaaacag
species | Oryza sativa |
transcript | LOC_Os06g36770.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAATEST: gi|58687462|gb|CK076149.1|CK076149
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
EST: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAATEST: gi|218499339|gb|FG949286.1|FG949286
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
EST: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAATEST: gi|58658882|gb|CK047562.1|CK047562
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
EST: CGACTCATTGATCGGCGAGAATCAGCTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAATEST: gi|58593657|gb|CF991965.1|CF991965
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
EST: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAATEST: gi|66912957|gb|CX099805.1|CX099805
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
EST: CGACTCATTGATCTGCGACAATCAACTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAATEST: gi|58674786|gb|CK063473.1|CK063473
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
EST: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAATEST: gi|58688813|gb|CK077500.1|CK077500
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
EST: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGAT ATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
genomic: CGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaatt ... ctttaaacagATTTGAGGAACATGAAGCACCTGGATCAAGATCCTTCTTTACAGAGATAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCCAACTCATTGTAATACACTGGCCTATAGCAGTTCAAAGGGTTCTATCCGACTCATTGATCTGCGACAATCAGCTTTGTGTGACAACCATTCCAAGATgttagtaattcatcttatgccttttacctgcaacattttatccgtgtgtactggaggtagtcgtggacttcttttgacggttgggacttggggctgcataagattctctattctatactagtaatagaatgtcacaatatcagcatgagataacaagaacctttaaacag
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