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AATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCATCGTTACAGGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAgtaagtactcctatgccgccaactctaccgacttgaaagtttagagattatatacatgcttggttgttcatttgagtcttcccatcttttaataggatgc...
species | Oryza sativa |
transcript | LOC_Os05g51630.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGA AATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATEST: gi|218494751|gb|FG955894.1|FG955894
genomic: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAgtaagtactc ... tcttttgcagAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCAT
EST: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGA AATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATEST: gi|58693113|gb|CK081800.1|CK081800
genomic: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAgtaagtactc ... tcttttgcagAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCAT
EST: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGA AATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATEST: gi|58686140|gb|CK074827.1|CK074827
genomic: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAgtaagtactc ... tcttttgcagAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCAT
EST: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGA AATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCATEST: gi|218492846|gb|FG945413.1|FG945413
genomic: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAgtaagtactc ... tcttttgcagAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCAT
EST: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGA AATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCAT
genomic: GGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAgtaagtactc ... tcttttgcagAATACCGAGAACCATCGGTGTAGCCATTCCAATGAGGGCGACTTTTTTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATATTATATCTTCTTGTTCTTCAATGTATTTTTGGGAAGCATCGTTACAGGATCTGCTTTAGATCAGCTTAAGGCATACATTCATCAGTCGGCAAATGAgtaagtactcctatgccgccaactctaccgacttgaaagtttagagattatatacatgcttggttgttcatttgagtcttcccatcttttaataggatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgccgcc