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AGGAAGTTGGTTCGCGCAAAAATGCTAGCTGTTTACCCGGAATGGTGCTAAATTTGAAAAAAGCTGTGTCATACTTGGATCATCTGGGCTTTGAGTGTAGgtacttgctttccaataaattcactttagacttctggtccatctataagcaccgttgcattttatttgtacttgtacagtttgggtcatggttcttacta...
species | Oryza sativa |
transcript | LOC_Os05g39230.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AATTTGAAAAAAGCTGTGTCATACTTGGATCATCTGGGCTTTGAGTGTAG TGCTGCTGGAGGCAGGTEST: gi|29689746|gb|CB686021.1|CB686021
genomic: AATTTGAAAAAAGCTGTGTCATACTTGGATCATCTGGGCTTTGAGTGTAGgtacttgctt ... tctcttacagTGCTGCTGGAGGCAGGT
EST: AATTTGAAAAAAGCTGTGTCATACTTGGATCATCTGGGCTTTGAGTGTAG TGCTGCTGGAGGCAGGTTACAATGCACGATGCAAAACATAGCGGATAATTT
genomic: AATTTGAAAAAAGCTGTGTCATACTTGGATCATCTGGGCTTTGAGTGTAGgtacttgctt ... tctcttacagTGCTGCTGGAGGCAGGTTAGAATGCACGATGCAAAACATAGCGGATAATTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGAAGTTGGTTCGCGCAAAAATGCTAGCTGTTTACCCGGAATGGTGCTAAATTTGAAAAAAGCTGTGTCATACTTGGATCATCTGGGCTTTGAGTGTAGgtacttgctttccaataaattcactttagacttctggtccatctataagcaccgttgcattttatttgtacttgtacagtttgggtcatggttcttacta
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