1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGTTCTGCATCAAATTCACATGTTCATGATGGAGCTGTTCAGACTCCTCTGACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAGgtatcagttatatatattatatatagtttatttcattagatgttcatccacccgctctctgcacgtattgtaacttgtaaatgttttatttcttgaaaag...
species | Oryza sativa |
transcript | LOC_Os02g48380.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAGGACAGEST: gi|58694986|gb|CK083673.1|CK083673
genomic: GACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAA-C----CAGgtatcagtta ... tgcagg
EST: GACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAG GEST: gi|58694986|gb|CK083673.1|CK083673
genomic: GACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAGgtatcagtta ... tgcaggacag-
EST: GACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAG G
genomic: GACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAGgtatcagtta ... tgcaggacag-
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTCTGCATCAAATTCACATGTTCATGATGGAGCTGTTCAGACTCCTCTGACACTGTTCACTGATAAATGGATGCGGTTGACTCATGAAGTTAAACCAGgtatcagttatatatattatatatagtttatttcattagatgttcatccacccgctctctgcacgtattgtaacttgtaaatgttttatttcttgaaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cacccgc