1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGTGACAAAGCTCAAGCAGAAAGGGACTATGTTCTGGCAGAGTTCAAGAGTGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgacttgtttgaaaattagaattaggttgtagttccaagtgctcaaggatgataagtcggagggctgtcagctgtttttggttgagtgaactga...
species | Oryza sativa |
transcript | LOC_Os01g68320.2 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTG ATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTGEST: gi|29664446|gb|CB660721.1|CB660721
genomic: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgac ... atttttgcagATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTG
EST: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTG ATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAAEST: gi|29629642|gb|CB634651.1|CB634651
genomic: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgac ... atttttgcagATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAA
EST: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTG ATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTGEST: gi|29630936|gb|CB635945.1|CB635945
genomic: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgac ... atttttgcagATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTG
EST: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTG ATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTGEST: gi|29643631|gb|CB648638.1|CB648638
genomic: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgac ... atttttgcagATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTG
EST: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTG ATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTGEST: gi|29629643|gb|CB634652.1|CB634652
genomic: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgac ... atttttgcagATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTG
EST: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTG ATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTG
genomic: TGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgac ... atttttgcagATGTCAAGGATATTAAGTGTGTGATAAATTTTGATTTTCCAACAACTCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGACAAAGCTCAAGCAGAAAGGGACTATGTTCTGGCAGAGTTCAAGAGTGGGAAAAGTCCTATAATGGCTGCCACAGATGTAGCGGCACGTGGTCTTGgtatggtgacttgtttgaaaattagaattaggttgtagttccaagtgctcaaggatgataagtcggagggctgtcagctgtttttggttgagtgaactga
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