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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaagaattctgcctgtatatgaaaacaaaagtaatctcatttaagttgttagtattacagctgatagtgaattattgataatgaaaactttagc...

Basic information

species Oryza sativa
transcript LOC_Os07g47580.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 7
lower sequence: GRMZM2G174204_T01 (Zea mays), 5'ss of exon 7
GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaagaattctgcctgtatatgaaaacaaaagtaatctcatttaagttgttagtattaca-gctgatagtgaattattgataatgaaaactttagc-------------------------------------------------------
||| || ||||||||||||||||||||||||||||||||||||||||||||||  |||||| || ||||||||||| ||||||||||||| ||||||||||||   |||| ||| |  |    |||   |   ||  || | |  | ||   ||   ||||||   |||     ||  | | |||  || |   |||||                                                         
GAAGTGCACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCCGATGTACACTTCTCTTGGTGTTATGACAAGGGGAACAATCATTGAGgtactccaagcatttttaccagttattgtagtcaa--tacttttgtgtag--tgactgtattaggtgctagccatggttcactga-gattacctctttatatcaccccctcccctcccctctatcgaaattgctgctcacaatagtattctttcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 7
lower sequence: GRMZM2G009876_T01 (Zea mays), 5'ss of exon 7
GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaagaattctgcctgtatatgaaaacaaaagtaatctcatttaagttgttagtattacagctgatagt---gaattattgataatgaaaactttagc-------------------------------------
||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||| ||||||||||||| |||||||||||||| |||| ||| |      || |  |   |  |        |  | | | || | |||   || |  | ||   |  ||| ||  | |      ||   |                                     
GAAGTGCACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCCAATGTACACTTCTCTTGGTGTTATGACAAGGGGAACGATCATTGAGgtatgccaagcatttttttaccat-tttatgtagtaccctgtgtagctgactagtaactatattagtttttcgtcatggtttactgggattatctctttgtacccctcgaaaattgctgcttacaatggtcttctttcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 7
lower sequence: GLYMA10G00490.1 (Glycine max), 5'ss of exon 7
GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgt-caagaattctgcctgtatatgaaaacaaa-agtaatctc---attta-agttgttagtattacagctgatagtgaatta----------ttgataatgaaaactttagc-------------------------------------------------------------
 ||||| || ||||| || ||  |||||   |||||||||||||| ||||| |  |||||| |  ||||||||||  | || ||||||||||| |||||||||| |       |||  | | || ||   ||   |  || || ||   | | | | |||   | |||  || ||||  | | ||           ||| | ||    |||   |                                                              
TAAATGCACATTCAATCTAGAATTAATTGGAGTGAAGAAAAACCCCAATGGCCCTATGTACACCTCTCTTGGTGTCATTACCAGGGGAACTATAATTGAGgtatttatgctgtttcctcttctaaattctaattgatggttatttccacactcacaattgaaggcatttgagttgatcctaacttgccctctctatttgctgatatgcactgatgtataatgtagctgtaatattatcaaaatgtgttgcttatttctttgcatactgcaatttcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 7
lower sequence: GLYMA10G10000.1 (Glycine max), 5'ss of exon 7
GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaagaattc-tgcctgtatatgaaaacaaaag--taatctcatttaagttgtt---agtattacagctgatagtgaattattgataatgaaaacttta-gc---------------------------------------------------------------------
 ||||| || ||||| || ||  |||||   |||||||||||||| ||||| |  |||||| |  ||||||||||  | || ||||||||||| |||||||||| ||     ||    | | || ||   ||   | |  || |  || |       ||    | |||  || |||||   | | ||| ||||||       || ||                                                                     
TAAATGCACATTCAATCTAGAATTAATTGGAGTGAAGAAAAACCCCAATGGCCCCATGTACACCTCTCTTGGTGTCATTACCAGGGGAACTATAATTGAGgtatttctgctgtttactcttctaaattctaattgatggttatttccactctcacaatttaaggcatttgagttgatatgcactgatttataatgttgctgatatgcactgatgtatatgtagctgtaatattatcaaaaatgtgttgcttatttctttgcatactgcaatttcag

upper sequence: LOC_Os07g47580.1 (Oryza sativa), 5'ss of exon 7
lower sequence: Vv08s0105g00280.t01 (Vitis vinifera), 5'ss of exon 7
GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgta-tgtcaagaattctgcctgt-atatgaaaaca-aaagtaatctca--tttaagttgttagtattacagctgatagtgaattattgataatgaaaactttagc
 ||||| |||||||||||||| ||||||   || |||||||| || ||||| ||||||||  || | ||||||||| |||| | ||| ||||||||||||||| | |      || || || | ||||||    | ||| | ||  ||  ||||       | | | |  |    |       |  || |  ||  ||   ||| 
CAAATGCACTTTCAACCTTGAGATAATTGGAGTAAAGAAAAATCCTAATGGCCAAATGTATACTTCCCTTGGTGTTATGACCAAGGGTACTATCATTGAGgtaatatttcttcttttgactcttatatgatgtgataaattgatgacaaatttactactccaatgtgatggtctctttattgctgatgctcctgttaatggtag-

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|58681488|gb|CK070175.1|CK070175
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|89193841|gb|CI018159.1|CI018159
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGGACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86542436|gb|CI182642.1|CI182642
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86824070|gb|CI260725.1|CI260725
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAATCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87032604|gb|CI266244.1|CI266244
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|218485729|gb|FG965787.1|FG965787
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88902846|gb|CI088384.1|CI088384
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|33658104|gb|CF280718.1|CF280718
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86512013|gb|CI154646.1|CI154646
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88276346|gb|CI396950.1|CI396950
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTTACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88480982|gb|CI418253.1|CI418253
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87013241|gb|CI265339.1|CI265339
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|218483038|gb|FG956503.1|FG956503
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTGAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|58679899|gb|CK068586.1|CK068586
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|218489658|gb|FG968764.1|FG968764
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88203250|gb|CI203099.1|CI203099
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88213234|gb|CI213083.1|CI213083
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87032959|gb|CI187583.1|CI187583
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86595161|gb|CI260400.1|CI260400
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|55408961|gb|CV721337.1|CV721337
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88217375|gb|CI217224.1|CI217224
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86546894|gb|CI187100.1|CI187100
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88227941|gb|CI227421.1|CI227421
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88212016|gb|CI211656.1|CI211656
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|33688903|gb|CF317142.1|CF317142
EST:     TNCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: T-CAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|29624519|gb|CB629530.1|CB629530
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|22307478|gb|BQ908700.1|BQ908700
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86599846|gb|CI256008.1|CI256008
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88902925|gb|CI088463.1|CI088463
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|15848297|gb|BI796573.1|BI796573
EST:     TCAAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: TC-AAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88466867|gb|CI539663.1|CI539663
EST:     TGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: TGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|29662524|gb|CB658799.1|CB658799
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|89189113|gb|CI012263.1|CI012263
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87034678|gb|CI189302.1|CI189302
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86599387|gb|CI251345.1|CI251345
EST:     TCAAATGTACTCTACTCTTGGTGTTTTGACCAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: TCAAATGTACTCTACTCTTGGTGTTTTGAC-AAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88838317|gb|CI373677.1|CI373677
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88218554|gb|CI218403.1|CI218403
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|218494317|gb|FG959910.1|FG959910
EST:     CTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCCTGTTGGAAAAGTTGTTTG
genomic: -TCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCC-TGCTGGAAAAGTTGTTTG
EST: gi|88521029|gb|CI448683.1|CI448683
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88472033|gb|CI409304.1|CI409304
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86526615|gb|CI166821.1|CI166821
EST:     TCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: TCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|89180335|gb|CI044614.1|CI044614
EST:     GAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88478659|gb|CI415930.1|CI415930
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88216072|gb|CI215921.1|CI215921
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88243732|gb|CI242854.1|CI242854
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87020361|gb|CI261225.1|CI261225
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|29668016|gb|CB664291.1|CB664291
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88282338|gb|CI403734.1|CI403734
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|33657880|gb|CF280494.1|CF280494
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88852632|gb|CI008825.1|CI008825
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86522597|gb|CI162803.1|CI162803
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86499796|gb|CI142429.1|CI142429
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGA-CGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86508231|gb|CI150864.1|CI150864
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|33658075|gb|CF280689.1|CF280689
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87028389|gb|CI263731.1|CI263731
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88487047|gb|CI424318.1|CI424318
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86595303|gb|CI262541.1|CI262541
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|8527444|gb|AU092259.1|AU092259
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87022380|gb|CI267517.1|CI267517
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|218478162|gb|FG952607.1|FG952607
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|15846700|gb|BI794976.1|BI794976
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88247740|gb|CI247589.1|CI247589
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88220513|gb|CI220073.1|CI220073
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88907479|gb|CI090273.1|CI090273
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86524051|gb|CI164257.1|CI164257
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88241353|gb|CI241202.1|CI241202
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86412595|gb|CI067000.1|CI067000
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86595320|gb|CI262558.1|CI262558
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTCGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86528308|gb|CI168514.1|CI168514
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86593534|gb|CI264413.1|CI264413
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88216088|gb|CI215937.1|CI215937
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86531880|gb|CI172086.1|CI172086
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88510885|gb|CI438391.1|CI438391
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86430517|gb|CI082940.1|CI082940
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87032829|gb|CI187453.1|CI187453
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86508710|gb|CI151343.1|CI151343
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88273573|gb|CI393979.1|CI393979
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGAC-AGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86896805|gb|CI317337.1|CI317337
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86492734|gb|CI135367.1|CI135367
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87022128|gb|CI259200.1|CI259200
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|87025269|gb|CI265834.1|CI265834
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|218480798|gb|FG956053.1|FG956053
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGA
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGA
EST: gi|33692112|gb|CF320351.1|CF320351
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86493139|gb|CI135772.1|CI135772
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88486150|gb|CI423421.1|CI423421
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86432117|gb|CI085728.1|CI085728
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86259659|gb|CI065532.1|CI065532
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86523492|gb|CI163698.1|CI163698
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|33813022|gb|CF332401.1|CF332401
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88848411|gb|CI086933.1|CI086933
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|86826901|gb|CI268792.1|CI268792
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|218500603|gb|FG956643.1|FG956643
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88238402|gb|CI238251.1|CI238251
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|88207774|gb|CI207623.1|CI207623
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
EST: gi|33809373|gb|CF330566.1|CF330566
EST:     GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAG                         GTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG
genomic: GTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 68 (upstream exon), 73 (downstream exon)
Score: 69

GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaag ... atcttttcagGTGAACGTTAGTGAACTTGGTCTGGTAACCCCTGCTGGAAAAGTTGTTTGGG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GAAATGTACTTTCAACCTTGACATAATTTCTGTGAAGAAAAACCCAAATGGTCAAATGTACTCTACTCTTGGTGTTTTGACAAGGGGAACTATCATTGAGgtatgtcaagaattctgcctgtatatgaaaacaaaagtaatctcatttaagttgttagtattacagctgatagtgaattattgataatgaaaactttagc

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