Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTCGATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttcaccatctcagtactgcaatcccatcagtaatgtgtttcacaccgtcgtatttgccactttactgacgctcgaagcatgcaaatattgcag

Basic information

species Oryza sativa
transcript LOC_Os09g32800.2
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os09g32800.2 (Oryza sativa), 5'ss of exon 6
lower sequence: GRMZM5G817037_T02 (Zea mays), 5'ss of exon 6
GATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTCGATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttcaccatctcagt-actgcaatcccatcagtaatgtgtttcacaccgtcgtatttgccactttactgacgctcgaagcatgcaaatattgcag
||||| |||||||| ||||||||| |||||||  ||||| |||| ||||| ||||| ||||| ||||||||||| ||||||||||||||| | | ||    |||| |  |   |||  |       |  | |||| |  ||   ||| | |||||   ||||  | | || ||||||||   |||||
GATGCTGTCACACCATTGTCGGAGTCAGAGGCCATCGATCTAGTTAAGGACGTGTTCGCATCTGCAACTGAGAGAGACATCTACACTgtaagctgcatttactcatttgccaaaattgcgc-----acctctttctcttcgatatatat-ccactccgctgatccac-aaacatgcaaaatatgcag

upper sequence: LOC_Os09g32800.2 (Oryza sativa), 5'ss of exon 6
lower sequence: GRMZM2G074386_T01 (Zea mays), 5'ss of exon 6
GATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTCGATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttcaccatctcagtactgcaatcccatcagtaatgtgtttcacaccgtcgtatttgccactttactgacgctcgaagcatgcaaatattgcag
||||| |||||||| ||||||||| |||||||  ||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||||| | | ||    |||| | |   |||             |||||| |       ||| | | ||  |  |||  | | || ||||||||   |||||
GATGCTGTCACACCATTGTCGGAGTCAGAGGCCATCGATCTAGTTAAGGATGTGTTTGCATCTGCAACTGAGAGAGACATCTACACTgtaagctgcatttgctcattgccaaaatattgc-----gcctgtttctcttttatatatat-ctaccctgttgatccac-aaacatgcaaaatatgcag

upper sequence: LOC_Os09g32800.2 (Oryza sativa), 5'ss of exon 6
lower sequence: Vv15s0048g00900.t01 (Vitis vinifera), 5'ss of exon 6
GATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTCGATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttcaccatctcagtactgcaatcccatcagtaatgtgtttcacaccgtcgtatt-tgccactttactgacgctcgaagcatgcaaatattgcag-------
||||| || || ||| | || ||| |||| || || |||||||||||   ||| |||||||| |||||||||||||| || ||||||||| |||      ||    ||||  ||       |||||  | |||||||  |   | || |||   ||||   | | | ||  | || || |  | |||       
GATGCTGTTACTCCTCTCTCTGAGCCAGAAGCAGTTGATTTAGTGAAAACTGTCTTTGCATCTGCAACTGAGAGGGATATATACACTgtaggttcttttctccacctacttgaa-------agtaacatttttcacatagagctgttatgctcttttaactatgttggatccttgaaagtgcttcaggtttctt

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88240063|gb|CI239225.1|CI239225
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88532692|gb|CI462194.1|CI462194
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|55436537|gb|CV731403.1|CV731403
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86534653|gb|CI174859.1|CI174859
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88586971|gb|CI704694.1|CI704694
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33818149|gb|CF334903.1|CF334903
EST:     TTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACCT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
genomic: TTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACA-CTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
EST: gi|218499612|gb|FG949767.1|FG949767
EST:     ATTTAGTGAAGGATGTGTATGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGA
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGA
EST: gi|88250654|gb|CI348884.1|CI348884
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88253970|gb|CI352596.1|CI352596
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86527433|gb|CI167639.1|CI167639
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|89165488|gb|CI102578.1|CI102578
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88583462|gb|CI700944.1|CI700944
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88216666|gb|CI214766.1|CI214766
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|15855480|gb|BI808292.1|BI808292
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAA-CTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86593168|gb|CI255630.1|CI255630
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|87032229|gb|CI262011.1|CI262011
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33806416|gb|CF329086.1|CF329086
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATTTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGGTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33681496|gb|CF309735.1|CF309735
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTCCACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88270878|gb|CI380178.1|CI380178
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAAGCTGGGACGAAGCGAGA
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAA-GCTGGGACGAAGCGAGA
EST: gi|88200045|gb|CI199895.1|CI199895
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCTACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88956647|gb|CI092839.1|CI092839
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|58608080|gb|CK036113.1|CK036113
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86545869|gb|CI186075.1|CI186075
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAGCTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88535226|gb|CI464012.1|CI464012
EST:     ATTTAGTGAAGGATGTTTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86527635|gb|CI167841.1|CI167841
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88200971|gb|CI201326.1|CI201326
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88836780|gb|CI014781.1|CI014781
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86511751|gb|CI154384.1|CI154384
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88386674|gb|CI682818.1|CI682818
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86413520|gb|CI019105.1|CI019105
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|3763562|gb|AU030314.1|AU030314
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88550971|gb|CI480460.1|CI480460
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATANTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88554285|gb|CI484454.1|CI484454
EST:     ATTTANTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|89189054|gb|CI012204.1|CI012204
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|55434860|gb|CV730555.1|CV730555
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86823995|gb|CI260689.1|CI260689
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33689749|gb|CF317988.1|CF317988
EST:     TTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTAACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
genomic: TTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCT-ACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
EST: gi|33818729|gb|CF335188.1|CF335188
EST:     TTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACCACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
genomic: TTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTA-CACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
EST: gi|88405112|gb|CI685561.1|CI685561
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88270736|gb|CI385994.1|CI385994
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|44669011|gb|CR282445.1|CR282445
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33683336|gb|CF311575.1|CF311575
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86524528|gb|CI164734.1|CI164734
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88413620|gb|CI526182.1|CI526182
EST:     ATTTANTGAAGGATGTGTTTNCATCGGCAACTGAGAGGGACATGTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|89162793|gb|CI099683.1|CI099683
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86493274|gb|CI135907.1|CI135907
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33660628|gb|CF291595.1|CF291595
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88830065|gb|CI074737.1|CI074737
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86592540|gb|CI253221.1|CI253221
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86258837|gb|CI000066.1|CI000066
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88428151|gb|CI557045.1|CI557045
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88533469|gb|CI461031.1|CI461031
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|89187440|gb|CI264259.1|CI264259
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88958729|gb|CI381532.1|CI381532
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33803802|gb|CF327775.1|CF327775
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGNATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTG-ATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
EST: gi|88907381|gb|CI090175.1|CI090175
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88211460|gb|CI211100.1|CI211100
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|87035386|gb|CI190008.1|CI190008
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGATGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88829933|gb|CI004971.1|CI004971
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86593079|gb|CI255541.1|CI255541
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|396941603|gb|HO188260.1|HO188260
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAACTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86522336|gb|CI162542.1|CI162542
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88238498|gb|CI238347.1|CI238347
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88391989|gb|CI683811.1|CI683811
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86503207|gb|CI145840.1|CI145840
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|55439809|gb|CV733215.1|CV733215
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATTTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88295482|gb|CI527845.1|CI527845
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|89199025|gb|CI253099.1|CI253099
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|89166087|gb|CI103177.1|CI103177
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86253685|gb|CI058412.1|CI058412
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|87013582|gb|CI267283.1|CI267283
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88413219|gb|CI523780.1|CI523780
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|87034062|gb|CI187424.1|CI187424
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33818143|gb|CF334900.1|CF334900
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88257652|gb|CI360238.1|CI360238
EST:     TTTAGTGAAGGATGTGTTTGCATCGGCAAGCTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: TTTAGTGAAGGATGTGTTTGCATCGGCAA-CTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88215696|gb|CI215545.1|CI215545
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33818106|gb|CF334879.1|CF334879
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88839225|gb|CI000697.1|CI000697
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|87035374|gb|CI189996.1|CI189996
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGATGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33804938|gb|CF328346.1|CF328346
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86502309|gb|CI144942.1|CI144942
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|88450183|gb|CI541944.1|CI541944
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86527148|gb|CI167354.1|CI167354
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86253702|gb|CI058429.1|CI058429
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|33683522|gb|CF311761.1|CF311761
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGTATAAGCTGGAGATAGTTGTCATCAACAAAGTTGGGACGAAGCGAGA
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTG-ATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGA
EST: gi|88728176|gb|CI751686.1|CI751686
EST:     ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: ATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
EST: gi|86875249|gb|CI322379.1|CI322379
EST:     TGAAGGATGTCTTTGCATCGGCAACTGAGAGGGACATCTACACT                         GGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG
genomic: TGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 122

GATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTCGATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttca ... aatattgcagGGTGATAAGCTGGAGATAGTTGTCATCAACAAAGCTGGGACGAAGCGAGAGTACATCGACCTGAGGAAGGACTAGATCGACGATTATGTTCTTCAGTTAC




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GATGCCGTCACACCTTTGTCGGAGACAGAGGCGGTCGATTTAGTGAAGGATGTGTTTGCATCGGCAACTGAGAGGGACATCTACACTgtatgtttcaccatctcagtactgcaatcccatcagtaatgtgtttcacaccgtcgtatttgccactttactgacgctcgaagcatgcaaatattgcag

- - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGAGG