1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCATTGTGATGATCCTACAACACAGCAAATAATGATGGATGAGATTCTCCAGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAGgtctgccccatgacattgttgcaaattgtatgatttgtatcatataccttttgaacctaaccaaacttctagattgttttaccatttacatagtgtaacg...
species | Oryza sativa |
transcript | LOC_Os05g01910.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAG CATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAGEST: gi|27577450|gb|CB000145.1|CB000145
genomic: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAGgtctgcccca ... tactttacagCATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAG
EST: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAG CATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAGEST: gi|27576978|gb|CA999672.1|CA999672
genomic: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAGgtctgcccca ... tactttacagCATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAG
EST: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAG CATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAEST: gi|58652414|gb|CK041094.1|CK041094
genomic: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAGgtctgcccca ... tactttacagCATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGA
EST: AGTCCGTTTGCTTGTTGGCTCAAGATCAATACGGCAACTACGTTGTTCAG CATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAGEST: gi|58662202|gb|CK050882.1|CK050882
genomic: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAGgtctgcccca ... tactttacagCATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAG
EST: AGTCCGTTTGCTTGTTGGCTCAAGATCAATACGGCAACTACGTTGTTCAG CATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAG
genomic: AGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAGgtctgcccca ... tactttacagCATGTACTGGAGCACGGAAAACCACATGAGAGATCTGCTATTATCGAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCATTGTGATGATCCTACAACACAGCAAATAATGATGGATGAGATTCTCCAGTCCGTTTGCTTGCTGGCTCAAGATCAATACGGCAACTACGTTGTTCAGgtctgccccatgacattgttgcaaattgtatgatttgtatcatataccttttgaacctaaccaaacttctagattgttttaccatttacatagtgtaacg
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