1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CAAAGCTTGTCCGTGATGCCTTTCAGCTTGCAAAGGAGAAATCCCCCTGCATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttagcattgtctttatcaatgcatgcaactagacatattattgttcacagtataataaactgtaattttttcctgctacag
species | Oryza sativa |
transcript | LOC_Os02g56000.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TCATTTTTATTGATGAAATTNACGCAATTGGGACAAAGCGTTTTTGATAG TTAAGNTAGTGGTTACAGAGAAGTEST: gi|29660288|gb|CB656563.1|CB656563
genomic: TCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTT-GATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGT
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|88844827|gb|CI022181.1|CI022181
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: AAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29682547|gb|CB678822.1|CB678822
genomic: AAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGTTGAAEST: gi|86415268|gb|CI069671.1|CI069671
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|87031011|gb|CI270159.1|CI270159
genomic: ACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|88828977|gb|CI073847.1|CI073847
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: GCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|8859408|gb|AU096726.1|AU096726
genomic: GCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: TCATTTTTATTGATGAAATTGNCCGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|89198421|gb|CI007481.1|CI007481
genomic: TCATTTTTATTGATGAAATTG-ACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29626138|gb|CB631149.1|CB631149
genomic: ATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|8527269|gb|AU092084.1|AU092084
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGC-ATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29661398|gb|CB657673.1|CB657673
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|94362567|gb|CI052686.1|CI052686
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: AATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|22304809|gb|BQ906031.1|BQ906031
genomic: AATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: TCATTTTTATTGATGAAATTGACGCNATTGGAACACAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|88849565|gb|CI089473.1|CI089473
genomic: TCATTTTTATTGATGAAATTGACGCAATTGGAACA-AAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: AAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29659490|gb|CB655765.1|CB655765
genomic: AAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|86858935|gb|CI275141.1|CI275141
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ACGCCATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29615761|gb|CB620773.1|CB620773
genomic: ACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|11173135|gb|AU164630.1|AU164630
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29615719|gb|CB620731.1|CB620731
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|86593962|gb|CI260191.1|CI260191
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|218495770|gb|FG962501.1|FG962501
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29683382|gb|CB679657.1|CB679657
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29682519|gb|CB678794.1|CB678794
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGTTGAAEST: gi|86823621|gb|CI258693.1|CI258693
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29615715|gb|CB620727.1|CB620727
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|89197922|gb|CI117400.1|CI117400
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: AAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29684874|gb|CB681149.1|CB681149
genomic: AAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAAEST: gi|29615721|gb|CB620733.1|CB620733
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
EST: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAG TGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA
genomic: ATCATTTTTATTGATGAAATTGACGCAATTGGAACAAAGCGTTTTGATAGgtacatttag ... cctgctacagTGAAGTTAGTGGTGACAGAGAAGTGCAGCGCACAATGTTGGAGTTGCTGAA