Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag...

Basic information

species Oryza sativa
transcript LOC_Os02g05630.1
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: GRMZM5G829894_T02 (Zea mays), 5'ss of exon 4
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaa---tttgtttgctta--gctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttac---tctaaag------------------------------------------------------------------------------------
|||| ||||| || ||||||||||||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| || || ||||||||||| | |     | |||||  |||  | |       | ||  ||  |     |  ||  | |     |   |  | ||  |    |    |  ||     |||||                                                                                     
GGACATGGCGAGTGGGTGGTGTTCTTGCTGTCTCTCGCGCATTTGGTGATAAACTCTTGAAGCAGTATGTTGTCGCTGACCCTGAAATCAAGgtttgtcatgcacttatgttttattacggattgtcgggatagtttttcagacctatcatggtttgagggaatatggtggggttgtaaacttgtaataagtgcctaaaaatggggattccatcatttagcaatgtcatacatcacccacaccccctgtagccatctgaaaacgatttttgctgttacaatcag

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: GRMZM5G829894_T03 (Zea mays), 5'ss of exon 1
--------GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaa---tttgtttgctta--gctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttac---tctaaag------------------------------------------------------------------------------------
        |||| ||||| || ||||||||||||||||| ||||| |||||||||||||| || |||||||||||||| || ||||| || || ||||||||||| | |     | |||||  |||  | |       | ||  ||  |     |  ||  | |     |   |  | ||  |    |    |  ||     |||||                                                                                     
ATTTGTAGGGACATGGCGAGTGGGTGGTGTTCTTGCTGTCTCTCGCGCATTTGGTGATAAACTCTTGAAGCAGTATGTTGTCGCTGACCCTGAAATCAAGgtttgtcatgcacttatgttttattacggattgtcgggatagtttttcagacctatcatggtttgagggaatatggtggggttgtaaacttgtaataagtgcctaaaaatggggattccatcatttagcaatgtcatacatcacccacaccccctgtagccatctgaaaacgatttttgctgttacaatcag

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: GRMZM2G166035_T02 (Zea mays), 5'ss of exon 6
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaatttgtttgcttagctctcaactaa--agccttctatctgcaaaataatattcatcatcgtaat-tggcattcccatgcatgttactctaaag------------------------------------------------------------------------------------
|||| ||| | || ||||| ||||| ||||| |||||||||||||||||||| || ||||||| |||||| |||||||| || || ||||||||||| | |   || ||   ||  || |  | |     |   | | |    || |||  ||   |    | ||| |||        |      | |   |||                                                                                     
GGACATGGAGAGTGGGTGGCGTTCTCGCTGTCTCTCGAGCATTTGGTGATAAACTCTTGAAGCCGTATGTTGTTGCTGACCCTGAAATCAAGgtttgtcatgcatttttgtttttactatggattgcctggatattttttccaaacatatcatggtttgaggaaatatggtgcgtttgtaataaatgcctaaaaacggggatcccatcataagcaatgtcatacatcactcccaacccccctgtagccatctgaaaacggcttttgctattacaatcag

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: GLYMA04G06250.1 (Glycine max), 5'ss of exon 7
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag------
| || ||| | ||||| |||||||||||||||||||| |||||||||||||  ||  ||||||||||||| |||||||||||||| ||  |||| || || | | || ||  |||  ||    ||  |   |  ||| |    |   ||     |||||  ||   |   ||  ||       |   | |||      
GAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGgtatgtct-actatggttagttacgtccattcttgaatatcttatatagttatggat-----tcatctcaacctgtgctcatatagggtgcatggttaagtgtaca

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: GLYMA14G12220.1 (Glycine max), 5'ss of exon 6
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgact-taatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag--
| || ||| | |||||||| |||||||||||||| || |||||||||||||  ||  ||||||||||||| |||||||||||||| ||| |||| ||  | |||| || |   |    |||    ||    | | |||    | | | || |  |||   ||   |     |  ||||  |  || | ||  |  
GAACTTGGAGAGTTGGTGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtgtgtttctaatatggtgaatccattcttggatatt-tcatatattcttagactcatctcaatctgtgtctgtatagattgcatgact--tagtatatggtt

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: GLYMA06G06310.1 (Glycine max), 5'ss of exon 6
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag-
| || ||| | ||||| |||||||||||||||||||| || ||||||||||  ||  ||||||||||||| |||||||||||||| ||  |||| || ||  | | ||| | |||  ||    ||  |   |  ||| |    |   ||     ||| | |         |    |||| | | | |    | 
GAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCGTTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATTCAGgtatgtctacaatggttag-ttacatccattcttgaatatgttatatagttatggattcatctcaacctgtgctcatatagggtgcacggttcacatttgt

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: GLYMA17G33690.2 (Glycine max), 5'ss of exon 7
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgact-taatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag
| || ||| | |||||||| |||||||||||||| || |||||||||||||  ||  ||||||||||||| |||||||||||||| ||| ||||     | |||| || |   |    ||    ||      ||  || |        ||    || |   |   |     |    |||||| |    || | 
GAACTTGGAGAGTTGGTGGAGTTCTTGCTGTTTCACGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtgcatttctaatatggtgaatccaatccattcttggatatttcatatattcttagattcagatgaatctgtgtctgtatagagtgcatgatttagtata-

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: AT5G10740.1 (Arabidopsis thaliana), 5'ss of exon 7
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgt-ttgacttaatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatc-atcgtaattggcattcccatgcatgttactctaaag
| || ||| | || || || |||||||| |||||||| || |||||||||  |||  ||||||| ||||| |||||||||||||| ||| |||| ||  | | | || | |    | | |    |  || | || | ||  |    |  | | || |   |  | ||  ||  |   ||    | | |  |   
GAACTTGGAGGGTAGGAGGAGTTCTTGCAGTTTCTCGTGCGTTTGGTGATCGGCTTCTGAAGCAATATGTTGTTGCTGATCCAGAAATCCAGgtcttttcatcacttctctaagaatcacattgcataatctttttgtcccct--tttgtctccagctgacaaatttctcaaacttttgtcattgaatacag--

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: AT4G31750.1 (Arabidopsis thaliana), 5'ss of exon 7
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgt-ttgactt------aatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag
| || ||| | ||||| || ||||||||||||||||| |||||||| |||| | | |||||||||||||| ||||||||||| |||||  |||| |||||||      ||  | |   | ||  | | ||  || |||   |   |   ||  | |   ||| | |   |||||  |||    |   | ||||      
GAACATGGAGAGTTGGAGGAGTTCTTGCTGTTTCTCGTGCATTTGGCGATAGGTTGTTGAAGCAGTATGTTGTTGCTGATCCGGAGATACAGgtattgactttttgccaaaatctcctcctatatattaaa-aatgccactttgttattaacaattgaacataacctgcattggatttcaatagttagctact------

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: Vv04s0008g07320.t01 (Vitis vinifera), 5'ss of exon 7
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactt---aatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag---
| || ||| | ||||| |||||||||||||||||||| |||||||||||||  || |||||||||||||| |||||||||||||| ||| |||| || ||     | ||| | |   ||||       | |   ||  ||||    |||  ||| ||   |   |||   |  | ||| |     | ||    ||   
GAACTTGGAGGGTTGGGGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGgtctggctctgagagttgatagtaaagctagttgacataat-ttgcatctagcgaattttatgca--gttaaaat---ctattccaagggcactcctaggcagaat

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: PP1S17_286V6.1 (Physcomitrella patens), 5'ss of exon 6
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaat-ttgtttgcttagctctcaactaaagccttctatct----gcaaaataatattcatcatcgtaattgg---cattcccatgcatgttactctaaag------------------
| || |||||||| ||||||||||||||||| ||||| |||||||| ||    ||  ||||  | |||||||| ||||| ||||| ||  ||||    |  ||  ||  | | ||| |||   ||||  |   ||||| |    ||| || ||    |   |  | | ||||   ||   | |||||  ||  | || |                   
GCACTTGGCGTGTGGGTGGTGTTCTTGCTGTCTCTCGGGCATTTGGGGACCGCCTTCTGAAAAAATATGTAGTCGCTGAGCCAGAAATTCAGgtggagcgcaaagtttctcgtttacctcctcactacggatgtctattttgttgcagaacaagtggctctaatggatttgggaacagctctatgcagcttcatttacacttgtttttttttatgcag

upper sequence: LOC_Os02g05630.1 (Oryza sativa), 5'ss of exon 6
lower sequence: PP1S225_37V6.1 (Physcomitrella patens), 5'ss of exon 6
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaatttgtttgcttagct--ctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag------------
| || |||||||| ||||| ||||||||||| ||||| ||||||||||||  |||  ||||  | ||||| ||||| || ||||| ||  |||||   || |   | | |||     |  | |||  |    |||  || |   |  || || |     |  |  |    ||  |  ||| | | | | |   |            
GTACTTGGCGTGTAGGTGGCGTTCTTGCTGTGTCTCGGGCATTTGGTGATCGGCTGCTGAAAAAATATGTTGTTGCCGAACCAGAAATTCAGgtt-agctcatcgtttctgccctcttagcacaataattaacttgaatttcagagttattagtggatgt-atgctgaagatatctttgcttctgatttttttgtttcctgtgcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5003494|gb|AU068643.1|AU068643
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|66916002|gb|CX102850.1|CX102850
EST:     ATGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAT                         GATGAGATTGTCGATAGCTCCCTCGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|29639786|gb|CB644795.1|CB644795
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|29677669|gb|CB673944.1|CB673944
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|163926798|gb|EG715086.1|EG715086
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|29666851|gb|CB663126.1|CB663126
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GGAGGAGATTGTCGATAG
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagG-AGGAGATTGTCGATAG
EST: gi|29662048|gb|CB658323.1|CB658323
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|29688008|gb|CB684283.1|CB684283
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCT
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCT
EST: gi|29615476|gb|CB620488.1|CB620488
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|29666985|gb|CB663260.1|CB663260
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|163920197|gb|EG714431.1|EG714431
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|29666852|gb|CB663127.1|CB663127
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|29640127|gb|CB645136.1|CB645136
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|33681625|gb|CF309864.1|CF309864
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|568785|gb|D39634.1|D39634
EST:     TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCNTTGAGTTCCTCATCCTTGCTAGCGATGGA
genomic: TTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGAGTTCCTCATCCTTGCTAGCGATGGA
EST: gi|87019102|gb|CI297303.1|CI297303
EST:     TTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAG                         GAGGAGATTGTCGATAGCTCCCTTGACGTTCCTCATCCTTGCTAGCGATGG
genomic: TTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgactta ... ttatttacagGAGGAGATTGTCGATAGCTCCCTTGA-GTTCCTCATCCTTGCTAGCGATGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGACGTGGCGTGTTGGTGGTGTTCTTGCTGTTTCTCGAGCATTTGGTGATAAGCTATTGAAGCAGTATGTAGTTGCTGATCCAGAGATCAAGgtttgacttaatttgtttgcttagctctcaactaaagccttctatctgcaaaataatattcatcatcgtaattggcattcccatgcatgttactctaaag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA