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ATCAGGGAAACCAAAGATAAAAGGTGTCTCAATGACTGAATTGTTCACCCCAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAGgtatgtgttcattttttttaataaaaaaatttattcataaccatttcagtagctatctaggttttcttgggagtgaaaaaagtgcagattaatttaaagt...
species | Oryza sativa |
transcript | LOC_Os02g04490.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: CAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAG AGTAAAGCTAAAGCTGAAAAGAATCAGTTGATGGGGCATAATGAAAATGAGEST: gi|29631405|gb|CB636414.1|CB636414
genomic: CAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAGgtatgtgttc ... catctgacagAGTAAAGCTAAAGCTGAAAAGAATCAGTTGATGGGGCATAATGAAAATGAG
EST: CAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAG AGTAAAGCTAAAGCTGAAAAGAATCAGTTGATGGGGCATAATGAAAATGAGEST: gi|29631205|gb|CB636214.1|CB636214
genomic: CAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAGgtatgtgttc ... catctgacagAGTAAAGCTAAAGCTGAAAAGAATCAGTTGATGGGGCATAATGAAAATGAG
EST: CAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAG AGTAAAGCTAAAGCTGAAAAGAATCAGTTGATGGGGCATAATGAAAATGAG
genomic: CAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAGgtatgtgttc ... catctgacagAGTAAAGCTAAAGCTGAAAAGAATCAGTTGATGGGGCATAATGAAAATGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCAGGGAAACCAAAGATAAAAGGTGTCTCAATGACTGAATTGTTCACCCCAGAACAAATTCAGGAACATATCAATAGTCTAAGGCTGTGGGTTGGTCAGgtatgtgttcattttttttaataaaaaaatttattcataaccatttcagtagctatctaggttttcttgggagtgaaaaaagtgcagattaatttaaagt
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